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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100800521   protochlorophyllide-dependent translocon component 52, chloroplastic 
 gma-r.7   100800521   protochlorophyllide-dependent translocon component 52, chloroplastic 
 gma-u.5   100784940   protochlorophyllide-dependent translocon component 52, chloroplastic 
 gma-u.5   102669508   protochlorophyllide-dependent translocon component 52, chloroplastic 
 mtr-u.5   11409748   protochlorophyllide-dependent translocon component 52, chloroplastic 
 mtr-u.5   11419030   protochlorophyllide-dependent translocon component 52, chloroplastic 
 mtr-u.5   11426578   protochlorophyllide-dependent translocon component 52, chloroplastic 
 ppo-u.5   7463577   protochlorophyllide-dependent translocon component 52, chloroplastic 
 ath-u.5   ACD1-LIKE   ACD1-like protein 
 bra-r.6   103863379   protochlorophyllide-dependent translocon component 52, chloroplastic 
 vvi-u.5   100263831   protochlorophyllide-dependent translocon component 52, chloroplastic 
 vvi-u.5   100241560   protochlorophyllide-dependent translocon component 52, chloroplastic 
 ghi-r.1   107938381   protochlorophyllide-dependent translocon component 52, chloroplastic 
 ghi-r.1   121204584   protochlorophyllide-dependent translocon component 52, chloroplastic 
 ghi-r.1   121204837   protochlorophyllide-dependent translocon component 52, chloroplastic 
 bna-r.1   106347103   protochlorophyllide-dependent translocon component 52, chloroplastic-like 
 bna-r.1   106442909   protochlorophyllide-dependent translocon component 52, chloroplastic 
 cit-r.1   102615553   protochlorophyllide-dependent translocon component 52, chloroplastic 
 sly-u.5   PTC52   flavonoid 8-hydroxylase 2, chloroplastic 
 sot-r.1   102604461   protochlorophyllide-dependent translocon component 52, chloroplastic-like 
 sot-r.1   102597185   protochlorophyllide-dependent translocon component 52, chloroplastic 
 nta-r.1   107760466   flavonoid 8-hydroxylase 1, chloroplastic 
 nta-r.1   107775201   flavonoid 8-hydroxylase 1, chloroplastic-like 
 osa-u.5   9272323   protochlorophyllide-dependent translocon component 52, chloroplastic-like 
 zma-u.5   100281213   uncharacterized LOC100281213 
 tae-r.2   123105522   protochlorophyllide-dependent translocon component 52, chloroplastic 
 tae-r.2   123105523   protochlorophyllide-dependent translocon component 52, chloroplastic 
 tae-r.2   123113832   protochlorophyllide-dependent translocon component 52, chloroplastic 
 hvu-r.1   123412415   protochlorophyllide-dependent translocon component 52, chloroplastic-like 
 hvu-r.1   123452858   protochlorophyllide-dependent translocon component 52, chloroplastic-like 
 sbi-r.1   8061126   protochlorophyllide-dependent translocon component 52, chloroplastic 
 sbi-r.1   8081216   protochlorophyllide-dependent translocon component 52, chloroplastic 
 bdi-r.1   100825042   protochlorophyllide-dependent translocon component 52, chloroplastic 

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Top 50 coexpressed genes to 100800521 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100800521 (gma-u.5 coexpression data)

CoexMap"100800521"


gmaLOC100800521 | Entrez gene ID : 100800521      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 1 1 2 3 2 1 1 2 2 1 1 3 2 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0010277 [list] [network] chlorophyllide a oxygenase activity  (10 genes)  IEA  
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (62 genes)  IEA  
Protein XP_003531241.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto_nucl 2,  cysk_nucl 2  (predict for XP_003531241.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003531241.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100800521
gma-r.7
for
100800521
gma-u.5
for
100784940
gma-u.5
for
102669508
mtr-u.5
for
11409748
mtr-u.5
for
11419030
mtr-u.5
for
11426578
ppo-u.5
for
7463577
ath-u.5
for
ACD1-LIKE
bra-r.6
for
103863379
vvi-u.5
for
100263831
vvi-u.5
for
100241560
ghi-r.1
for
107938381
ghi-r.1
for
121204584
ghi-r.1
for
121204837
bna-r.1
for
106347103
bna-r.1
for
106442909
cit-r.1
for
102615553
sly-u.5
for
PTC52
sot-r.1
for
102604461
sot-r.1
for
102597185
nta-r.1
for
107760466
nta-r.1
for
107775201
osa-u.5
for
9272323
zma-u.5
for
100281213
tae-r.2
for
123105522
tae-r.2
for
123105523
tae-r.2
for
123113832
hvu-r.1
for
123412415
hvu-r.1
for
123452858
sbi-r.1
for
8061126
sbi-r.1
for
8081216
bdi-r.1
for
100825042


Ortholog ID: 3486
Species gma gma gma mtr mtr mtr ppo ath bra vvi vvi ghi ghi ghi bna bna cit sly sot sot nta nta osa osa osa zma tae tae tae hvu hvu sbi sbi bdi
Symbol LOC100800521 LOC100784940 LOC102669508 LOC11409748 LOC11419030 LOC11426578 LOC7463577 ACD1-LIKE LOC103863379 LOC100263831 LOC100241560 LOC107938381 LOC107938383 LOC107938382 LOC106347103 LOC106442909 LOC102615553 PTC52 LOC102604461 LOC102597185 LOC107760466 LOC107775201 LOC9272323 LOC4334498 LOC4334497 LOC100281213 LOC123113832 LOC123168310 LOC123150165 LOC123412415 LOC123452858 LOC8061126 LOC8081216 LOC100825042
Function* protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic ACD1-like protein protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic-like protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic flavonoid 8-hydroxylase 2, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic-like protochlorophyllide-dependent translocon component 52, chloroplastic flavonoid 8-hydroxylase 1, chloroplastic flavonoid 8-hydroxylase 1, chloroplastic-like protochlorophyllide-dependent translocon component 52, chloroplastic-like protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic uncharacterized LOC100281213 protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic-like protochlorophyllide-dependent translocon component 52, chloroplastic-like protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic protochlorophyllide-dependent translocon component 52, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma01200 Carbon metabolism 3
gma00030 Pentose phosphate pathway 2
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma00010 Glycolysis / Gluconeogenesis 4
gma01200 Carbon metabolism 4
gma00196 Photosynthesis - antenna proteins 3
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 2
gma03083 Polycomb repressive complex 2
gma03040 Spliceosome 2
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 4
mtr01200 Carbon metabolism 4
mtr00195 Photosynthesis 3
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 5
ppo01200 Carbon metabolism 5
ppo00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00260 Glycine, serine and threonine metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi04075 Plant hormone signal transduction 2
vvi00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00710 Carbon fixation by Calvin cycle 3
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 3
sot00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00650 Butanoate metabolism 2
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta00380 Tryptophan metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa00940 Phenylpropanoid biosynthesis 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae04016 MAPK signaling pathway - plant 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
tae00620 Pyruvate metabolism 3
tae00785 Lipoic acid metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00030 Pentose phosphate pathway 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100800521 100784940 102669508 11409748 11419030 11426578 7463577 828670 103863379 100263831 100241560 107938381 107938383 107938382 106347103 106442909 102615553 101255583 102604461 102597185 107760466 107775201 9272323 4334498 4334497 100281213 123113832 123168310 123150165 123412415 123452858 8061126 8081216 100825042
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