ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100800527	uncharacterized LOC100800527
gma-r.7	100800527	uncharacterized LOC100800527
gma-m.5	100800527	uncharacterized LOC100800527
gma-u.5	100809742	uncharacterized LOC100809742
mtr-u.5	25500713	uncharacterized LOC25500713
ppo-u.5	7489820	uncharacterized LOC7489820
ppo-u.5	7457392	uncharacterized LOC7457392
ppo-u.5	7475610	uncharacterized LOC7475610
ath-u.5	AT3G61690	nucleotidyltransferase
vvi-u.5	100241322	uncharacterized LOC100241322
vvi-u.5	100248390	uncharacterized LOC100248390
sly-u.5	104649446	uncharacterized LOC104649446
sly-u.5	101252826	uncharacterized LOC101252826
osa-u.5	4332026	uncharacterized LOC4332026
zma-u.5	100275262	nucleotidyltransferase
zma-u.5	103639449	nucleotidyltransferase

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006598912.1 [sequence] [blastp]
XP_006598913.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for XP_006598912.1)
nucl 10	(predict for XP_006598913.1)

Subcellular
localization
TargetP

other 7	(predict for XP_006598912.1)
other 7	(predict for XP_006598913.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100800527	gma-r.7 for 100800527	gma-m.5 for 100800527	gma-u.5 for 100809742	mtr-u.5 for 25500713	ppo-u.5 for 7489820	ppo-u.5 for 7457392	ppo-u.5 for 7475610	ath-u.5 for AT3G61690	vvi-u.5 for 100241322	vvi-u.5 for 100248390	sly-u.5 for 104649446	sly-u.5 for 101252826	osa-u.5 for 4332026	zma-u.5 for 100275262	zma-u.5 for 103639449

Ortholog

Ortholog ID: 4256

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100809742

uncharacterized LOC100800527

uncharacterized LOC25500713

uncharacterized LOC7494146

uncharacterized LOC7489820

nucleotidyltransferase

uncharacterized LOC103830317

uncharacterized LOC103841993

uncharacterized LOC100248390

uncharacterized LOC100241322

uncharacterized LOC107952948

uncharacterized LOC107916596

uncharacterized BNAC08G31620D

uncharacterized LOC106353282

uncharacterized LOC127901014

uncharacterized LOC127901015

uncharacterized LOC101252826

uncharacterized LOC104649446

uncharacterized LOC102605341

uncharacterized LOC102604253

uncharacterized LOC107759179

uncharacterized LOC107768201

uncharacterized LOC4332026

nucleotidyltransferase

uncharacterized LOC123093015

uncharacterized LOC123098301

uncharacterized LOC123449352

uncharacterized LOC8054214

uncharacterized LOC100841269

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2
vvi03040	Spliceosome	2
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	5
ghi03250	Viral life cycle - HIV-1	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00730	Thiamine metabolism	2
bna00900	Terpenoid backbone biosynthesis	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	3
nta03250	Viral life cycle - HIV-1	3
nta04141	Protein processing in endoplasmic reticulum	2
nta04148	Efferocytosis	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00310	Lysine degradation	2
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

100809742

100800527

25500713

7494146

7489820

825342

103830317

103841993

100248390

100241322

107952948

107916596

106415398

106353282

127901014

127901015

101252826

104649446

102605341

102604253

107759179

107768201

4332026

100275262

103639449

123093015

123098301

123449352

8054214

100841269

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100800527 (gma-u.5 coexpression data)

Top 50 enrichment test to 100800527 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	3	1	2	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100800527 (gma-u.5 coexpression data)

Top 50 enrichment test to 100800527 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**