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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100803919   protein SCARECROW 
 gma-r.7   100803919   protein SCARECROW 
 gma-u.5   100806779   protein SCARECROW 
 mtr-u.5   11423464   protein SCARECROW 
 ppo-u.5   18100050   protein SCARECROW 
 ath-u.5   SCR   GRAS family transcription factor 
 vvi-u.5   100265598   protein SCARECROW 
 sly-u.5   101255150   GRAS family transcription factor 15 
 osa-u.5   4349638   protein SCARECROW 1-like 
 osa-u.5   4351362   protein SCARECROW 2-like 
 zma-u.5   100274320   uncharacterized LOC100274320 

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Top 50 coexpressed genes to 100803919 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100803919 (gma-u.5 coexpression data)

CoexMap"100803919"


gmaLOC100803919 | Entrez gene ID : 100803919      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051457 [list] [network] maintenance of protein location in nucleus  (4 genes)  IEA  
GO:0090610 [list] [network] bundle sheath cell fate specification  (4 genes)  IEA  
GO:0009956 [list] [network] radial pattern formation  (6 genes)  IEA  
GO:0008356 [list] [network] asymmetric cell division  (13 genes)  IEA  
GO:0048366 [list] [network] leaf development  (23 genes)  IEA  
GO:0009630 [list] [network] gravitropism  (37 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (1503 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
Protein XP_003533642.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_003533642.1)
Subcellular
localization
TargetP
chlo 6,  other 6  (predict for XP_003533642.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100803919

.
gma-r.7
for
100803919

.
gma-u.5
for
100806779

.
mtr-u.5
for
11423464

.
ppo-u.5
for
18100050

.
ath-u.5
for
SCR

.
vvi-u.5
for
100265598

.
sly-u.5
for
101255150

.
osa-u.5
for
4349638

.
osa-u.5
for
4351362

.
zma-u.5
for
100274320

.


Ortholog ID: 6290
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi nta nta
Symbol SCR LOC100803919 LOC100806779 LOC101255150 LOC4351362 LOC4349638 LOC100274320 LOC103841338 LOC100265598 LOC18100050 LOC11423464 LOC123120393 LOC123086427 LOC123448109 LOC123397967 LOC107935940 LOC107941830 LOC106415494 LOC106415282 LOC8067627 LOC110429610 LOC102580378 LOC102625823 LOC100833621 LOC107806470 LOC107831618
Function* GRAS family transcription factor protein SCARECROW protein SCARECROW GRAS family transcription factor 15 protein SCARECROW 2-like protein SCARECROW 1-like uncharacterized LOC100274320 protein SCARECROW protein SCARECROW protein SCARECROW protein SCARECROW protein SCARECROW 2-like protein SCARECROW 2 protein SCARECROW 2-like protein SCARECROW 1 protein SCARECROW protein SCARECROW protein SCARECROW-like protein SCARECROW-like protein SCARECROW protein SCARECROW-like protein SCARECROW protein SCARECROW protein SCARECROW protein SCARECROW protein SCARECROW-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 3
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00240 Pyrimidine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824589 100803919 100806779 101255150 4351362 4349638 100274320 103841338 100265598 18100050 11423464 123120393 123086427 123448109 123397967 107935940 107941830 106415494 106415282 8067627 110429610 102580378 102625823 100833621 107806470 107831618
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