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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100805606   photosystem II stability/assembly factor HCF136, chloroplastic 
 gma-r.7   100805606   photosystem II stability/assembly factor HCF136, chloroplastic 
 gma-m.5   100805606   photosystem II stability/assembly factor HCF136, chloroplastic 
 gma-u.5   100810566   photosystem II stability/assembly factor HCF136, chloroplastic 
 mtr-u.5   11439200   photosystem II stability/assembly factor HCF136, chloroplastic 
 ppo-u.5   7457185   photosystem II stability/assembly factor HCF136, chloroplastic 
 ath-u.5   HCF136   photosystem II stability/assembly factor, chloroplast (HCF136) 
 vvi-u.5   100254346   photosystem II stability/assembly factor HCF136, chloroplastic 
 sly-u.5   101259493   photosystem II stability/assembly factor HCF136, chloroplastic 
 osa-u.5   107275792   photosystem II stability/assembly factor HCF136, chloroplastic 
 zma-u.5   103629543   photosystem II stability/assembly factor HCF136, chloroplastic 

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Top 50 coexpressed genes to 100805606 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100805606 (gma-u.5 coexpression data)

CoexMap"100805606"


gmaLOC100805606 | Entrez gene ID : 100805606      
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003540641.1 [sequence] [blastp]
XP_014619915.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 4  (predict for XP_003540641.1)
mito 6,  chlo 4  (predict for XP_014619915.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_003540641.1)
chlo 8,  mito 4  (predict for XP_014619915.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100805606
gma-r.7
for
100805606
gma-m.5
for
100805606
gma-u.5
for
100810566
mtr-u.5
for
11439200
ppo-u.5
for
7457185
ath-u.5
for
HCF136
vvi-u.5
for
100254346
sly-u.5
for
101259493
osa-u.5
for
107275792
zma-u.5
for
103629543


Ortholog ID: 10321
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100810566 LOC100805606 LOC11439200 LOC7457185 HCF136 LOC103860525 LOC100254346 LOC107886898 LOC107886826 LOC111208780 LOC106439899 LOC102609414 LOC101259493 LOC102603196 LOC107787720 LOC107830733 LOC107275792 LOC103629543 LOC123168012 LOC123161889 LOC123409041 LOC8069241 LOC100843413 CHLRE_06g273700v5
Function* photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor, chloroplast (HCF136) photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic photosystem II stability/assembly factor HCF136, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 6
ath01200 Carbon metabolism 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 11
vvi00630 Glyoxylate and dicarboxylate metabolism 6
vvi00710 Carbon fixation by Calvin cycle 6
vvi00260 Glycine, serine and threonine metabolism 5
vvi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi01230 Biosynthesis of amino acids 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00710 Carbon fixation by Calvin cycle 3
cit03060 Protein export 2
cit03010 Ribosome 2
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00970 Aminoacyl-tRNA biosynthesis 2
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
osa01200 Carbon metabolism 3
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
tae00051 Fructose and mannose metabolism 2
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu00195 Photosynthesis 2
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 2
sbi00196 Photosynthesis - antenna proteins 2
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00620 Pyruvate metabolism 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100810566 100805606 11439200 7457185 832376 103860525 100254346 107886898 107886826 111208780 106439899 102609414 101259493 102603196 107787720 107830733 107275792 103629543 123168012 123161889 123409041 8069241 100843413 5721786
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