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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100805682   protein TONSOKU 
 gma-r.7   100805682   protein TONSOKU 
 gma-m.5   100805682   protein TONSOKU 
 gma-u.5   100817536   protein TONSOKU 
 mtr-u.5   11436212   protein TONSOKU 
 ath-u.5   TSK   tetratricopeptide repeat (TPR)-containing protein 
 vvi-u.5   100264422   protein TONSOKU 
 sly-u.5   101243658   protein TONSOKU 
 osa-u.5   4330936   protein TONSOKU 
 osa-u.5   4330942   protein TONSOKU-like 
 zma-u.5   103504718   Protein TONSOKU 

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Top 50 coexpressed genes to 100805682 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100805682 (gma-u.5 coexpression data)

CoexMap"100805682"


gmaLOC100805682 | Entrez gene ID : 100805682      
Species gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 4 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0072423 [list] [network] response to DNA damage checkpoint signaling  (2 genes)  IEA  
GO:0009933 [list] [network] meristem structural organization  (12 genes)  IEA  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (98 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003532859.1 [sequence] [blastp]
XP_006585323.1 [sequence] [blastp]
XP_025985410.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  vacu 1  (predict for XP_003532859.1)
nucl 5,  cyto 3,  vacu 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_006585323.1)
nucl 4,  cyto 4,  chlo 1,  mito 1,  vacu 1,  chlo_mito 1  (predict for XP_025985410.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003532859.1)
other 8  (predict for XP_006585323.1)
other 8  (predict for XP_025985410.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100805682

.
gma-r.7
for
100805682

.
gma-m.5
for
100805682

.
gma-u.5
for
100817536

.
mtr-u.5
for
11436212

.
ath-u.5
for
TSK

.
vvi-u.5
for
100264422

.
sly-u.5
for
101243658

.
osa-u.5
for
4330936

.
osa-u.5
for
4330942

.
zma-u.5
for
103504718

.


Ortholog ID: 9493
Species ath gma gma sly osa osa zma bra vvi mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TSK LOC100805682 LOC100817536 LOC101243658 LOC4330936 LOC4330942 LOC103504718 LOC103869531 LOC100264422 LOC11436212 LOC123145796 LOC123128664 LOC123402624 LOC107948418 LOC107902163 LOC106451934 LOC106446831 CHLRE_02g112100v5 LOC8081952 LOC102586614 LOC102630570 LOC100824294 LOC107818764 LOC107778941
Function* tetratricopeptide repeat (TPR)-containing protein protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU-like Protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU-like protein TONSOKU-like uncharacterized protein protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU protein TONSOKU-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 8
ath03440 Homologous recombination 2
ath03460 Fanconi anemia pathway 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 10
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 4
zma00270 Cysteine and methionine metabolism 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 3
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
mtr00230 Purine metabolism 3
mtr00240 Pyrimidine metabolism 3
mtr00480 Glutathione metabolism 3
mtr01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 8
tae00270 Cysteine and methionine metabolism 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi04814 Motor proteins 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 5
bna03440 Homologous recombination 4
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 4
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
bna01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 10
sbi03460 Fanconi anemia pathway 3
sbi03420 Nucleotide excision repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821404 100805682 100817536 101243658 4330936 4330942 103504718 103869531 100264422 11436212 123145796 123128664 123402624 107948418 107902163 106451934 106446831 5725467 8081952 102586614 102630570 100824294 107818764 107778941
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