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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100806084   mediator of RNA polymerase II transcription subunit 10-like 
 gma-r.7   100806084   mediator of RNA polymerase II transcription subunit 10-like 
 gma-u.5   100797517   mediator of RNA polymerase II transcription subunit 10b 
 mtr-u.5   11411258   mediator of RNA polymerase II transcription subunit 10b 
 ppo-u.5   7477820   mediator of RNA polymerase II transcription subunit 10b 
 ppo-u.5   7465342   mediator of RNA polymerase II transcription subunit 10b 
 ath-u.5   MED10A   Mediator complex, subunit Med10 
 ath-u.5   AT1G26665   Mediator complex, subunit Med10 
 vvi-u.5   100263293   mediator of RNA polymerase II transcription subunit 10b 
 sly-u.5   101259273   mediator of RNA polymerase II transcription subunit 10b 
 osa-u.5   4347648   mediator of RNA polymerase II transcription subunit 10b 
 zma-u.5   100284160   mediator complex subunit 10 CG5057-PA 
 zma-u.5   100283957   mediator complex subunit 10 CG5057-PA 

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Top 50 coexpressed genes to 100806084 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100806084 (gma-u.5 coexpression data)

CoexMap"100806084"


gmaLOC100806084 | Entrez gene ID : 100806084      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (294 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (75 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (217 genes)  IEA  
Protein NP_001241316.1 [sequence] [blastp]
XP_006601828.1 [sequence] [blastp]
XP_040867558.1 [sequence] [blastp]
XP_040867559.1 [sequence] [blastp]
XP_040867560.1 [sequence] [blastp]
XP_040867561.1 [sequence] [blastp]
XP_040867562.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001241316.1)
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_006601828.1)
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040867558.1)
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040867559.1)
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040867560.1)
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040867561.1)
nucl 3,  cyto 3,  nucl_plas 3,  plas 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040867562.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001241316.1)
other 8  (predict for XP_006601828.1)
other 8  (predict for XP_040867558.1)
other 8  (predict for XP_040867559.1)
other 8  (predict for XP_040867560.1)
other 8  (predict for XP_040867561.1)
other 8  (predict for XP_040867562.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100806084

.
gma-r.7
for
100806084

.
gma-u.5
for
100797517

.
mtr-u.5
for
11411258

.
ppo-u.5
for
7477820

.
ppo-u.5
for
7465342

.
ath-u.5
for
MED10A

.
ath-u.5
for
AT1G26665

.
vvi-u.5
for
100263293

.
sly-u.5
for
101259273

.
osa-u.5
for
4347648

.
zma-u.5
for
100284160

.
zma-u.5
for
100283957

.


Ortholog ID: 4132
Species ath ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G26665 MED10A LOC100797517 LOC100806084 LOC101259273 LOC4347648 LOC100284160 LOC100283957 LOC103829197 LOC100263293 LOC7477820 LOC7465342 LOC11411258 LOC123112793 LOC123071838 LOC121211168 LOC121224353 LOC106358097 LOC106425555 CHLRE_12g556450v5 LOC8054888 LOC102597486 LOC102608713 LOC100820848 LOC107832650 LOC107760978
Function* Mediator complex, subunit Med10 Mediator complex, subunit Med10 mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10-like mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator complex subunit 10 CG5057-PA mediator complex subunit 10 CG5057-PA mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b-like mediator of RNA polymerase II transcription subunit 10b uncharacterized protein mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b-like mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b mediator of RNA polymerase II transcription subunit 10b-like mediator of RNA polymerase II transcription subunit 10b-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 3
gma04141 Protein processing in endoplasmic reticulum 3
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 3
osa00600 Sphingolipid metabolism 2
osa04142 Lysosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna04141 Protein processing in endoplasmic reticulum 6
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre04145 Phagosome 3
cre03040 Spliceosome 2
cre04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839207 834196 100797517 100806084 101259273 4347648 100284160 100283957 103829197 100263293 7477820 7465342 11411258 123112793 123071838 121211168 121224353 106358097 106425555 66055841 8054888 102597486 102608713 100820848 107832650 107760978
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