ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100806477	uncharacterized LOC100806477
gma-r.7	100806477	uncharacterized LOC100806477
mtr-u.5	11435645	uncharacterized LOC11435645
ppo-u.5	7480612	uncharacterized LOC7480612
ath-u.5	AT4G34140	D111/G-patch domain-containing protein
bra-r.6	103841186	uncharacterized LOC103841186
vvi-u.5	100245077	uncharacterized LOC100245077
ghi-r.1	107887160	uncharacterized LOC107887160
ghi-r.1	107908424	uncharacterized LOC107908424
bna-r.1	106396539	uncharacterized LOC106396539
bna-r.1	106441985	uncharacterized LOC106441985
cit-r.1	102611874	uncharacterized LOC102611874
sly-u.5	101262002	SUPPRESSOR OF ABI3-5
sot-r.1	102602688	uncharacterized LOC102602688
nta-r.1	107829936	uncharacterized LOC107829936
nta-r.1	107815216	uncharacterized LOC107815216
osa-u.5	4327632	SUPPRESSOR OF ABI3-5
zma-u.5	100383231	uncharacterized LOC100383231
tae-r.2	123077278	RNA-binding protein 5
tae-r.2	123068771	RNA-binding protein 10
hvu-r.1	123442801	uncharacterized LOC123442801
sbi-r.1	8056554	uncharacterized LOC8056554
bdi-r.1	100838676	RNA-binding protein 10

Annotation

functional annotation

KEGG

GO BP

GO:0000398 [list] [network] mRNA splicing, via spliceosome

(282 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

GO:0003723 [list] [network] RNA binding

(2019 genes)

IEA

Protein

XP_006578651.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_006578651.1)

Subcellular
localization
TargetP

other 9

(predict for XP_006578651.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100806477	gma-r.7 for 100806477	mtr-u.5 for 11435645	ppo-u.5 for 7480612	ath-u.5 for AT4G34140	bra-r.6 for 103841186	vvi-u.5 for 100245077	ghi-r.1 for 107887160	ghi-r.1 for 107908424	bna-r.1 for 106396539	bna-r.1 for 106441985	cit-r.1 for 102611874	sly-u.5 for 101262002	sot-r.1 for 102602688	nta-r.1 for 107829936	nta-r.1 for 107815216	osa-u.5 for 4327632	zma-u.5 for 100383231	tae-r.2 for 123077278	tae-r.2 for 123068771	hvu-r.1 for 123442801	sbi-r.1 for 8056554	bdi-r.1 for 100838676

Ortholog

Ortholog ID: 11720

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100806477

uncharacterized LOC11435645

uncharacterized LOC7480612

D111/G-patch domain-containing protein

uncharacterized LOC103841186

uncharacterized LOC100245077

uncharacterized LOC107887160

uncharacterized LOC107908424

uncharacterized LOC106396539

uncharacterized LOC106441985

uncharacterized LOC102611874

SUPPRESSOR OF ABI3-5

uncharacterized LOC102602688

uncharacterized LOC107829936

uncharacterized LOC107815216

SUPPRESSOR OF ABI3-5

uncharacterized LOC100383231

RNA-binding protein 5

RNA-binding protein 10

uncharacterized LOC123442801

uncharacterized LOC8056554

RNA-binding protein 10

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	6
vvi03040	Spliceosome	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	4
ghi03460	Fanconi anemia pathway	3
ghi00730	Thiamine metabolism	2
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	3
ghi04136	Autophagy - other	2
ghi03083	Polycomb repressive complex	2
ghi03250	Viral life cycle - HIV-1	2
ghi00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	4
sly03013	Nucleocytoplasmic transport	2
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00510	N-Glycan biosynthesis	2
sot00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00562	Inositol phosphate metabolism	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	3
tae03410	Base excision repair	3
tae03420	Nucleotide excision repair	3
tae03430	Mismatch repair	3
tae03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03460	Fanconi anemia pathway	3
tae00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

Expression

Expression pattern

Entrez Gene ID^*

100806477

11435645

7480612

829562

103841186

100245077

107887160

107908424

106396539

106441985

102611874

101262002

102602688

107829936

107815216

4327632

100383231

123077278

123068771

123442801

8056554

100838676

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100806477 (gma-u.5 coexpression data)

Top 50 enrichment test to 100806477 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	1	1	1	2	2	1	1	1	2	1	1	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100806477 (gma-u.5 coexpression data)

Top 50 enrichment test to 100806477 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**