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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100807645   RNA-binding KH domain-containing protein PEPPER 
 gma-r.7   100807645   RNA-binding KH domain-containing protein PEPPER 
 gma-u.5   100817448   RNA-binding KH domain-containing protein PEPPER 
 gma-u.5   100815466   RNA-binding KH domain-containing protein PEPPER 
 gma-u.5   100802089   RNA-binding KH domain-containing protein PEPPER 
 mtr-u.5   11441151   RNA-binding KH domain-containing protein PEPPER 
 mtr-u.5   11418634   RNA-binding KH domain-containing protein PEPPER 
 ppo-u.5   18100778   RNA-binding KH domain-containing protein PEPPER 
 ppo-u.5   18107551   RNA-binding KH domain-containing protein PEPPER 
 ath-u.5   PEP   RNA-binding KH domain-containing protein 
 vvi-u.5   100261643   RNA-binding KH domain-containing protein PEPPER 
 sly-u.5   101254606   RNA-binding KH domain-containing protein PEPPER 
 osa-u.5   4349406   RNA-binding KH domain-containing protein PEPPER 
 zma-u.5   100282383   nucleic acid binding protein 
 zma-u.5   100283534   nucleic acid binding protein 

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Top 50 coexpressed genes to 100807645 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100807645 (gma-u.5 coexpression data)

CoexMap"100807645"


gmaLOC100807645 | Entrez gene ID : 100807645      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (3741 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_025982245.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 2,  chlo 1,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1,  cyto_E.R. 1  (predict for XP_025982245.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_025982245.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100807645

.
gma-r.7
for
100807645

.
gma-u.5
for
100817448

.
gma-u.5
for
100815466

.
gma-u.5
for
100802089

.
mtr-u.5
for
11441151

.
mtr-u.5
for
11418634

.
ppo-u.5
for
18100778

.
ppo-u.5
for
18107551

.
ath-u.5
for
PEP

.
vvi-u.5
for
100261643

.
sly-u.5
for
101254606

.
osa-u.5
for
4349406

.
zma-u.5
for
100282383

.
zma-u.5
for
100283534

.


Ortholog ID: 5351
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna sbi sot sot cit bdi nta nta
Symbol PEP LOC100817448 LOC100802089 LOC101254606 LOC4349406 LOC100282383 LOC100283534 LOC103861600 LOC100261643 LOC18100778 LOC18107551 LOC11418634 LOC11441151 LOC123181657 LOC123128241 LOC123439185 LOC107926280 LOC107907369 LOC106410792 LOC8058065 LOC102580072 LOC102587078 LOC102607227 LOC100825327 LOC107775003 LOC107826371
Function* RNA-binding KH domain-containing protein RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER nucleic acid binding protein nucleic acid binding protein RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER-like RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER-like RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER-like RNA-binding KH domain-containing protein PEPPER-like RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER RNA-binding KH domain-containing protein PEPPER
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04122 Sulfur relay system 2
gma00500 Starch and sucrose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
gma00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00310 Lysine degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi03015 mRNA surveillance pathway 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
ppo03010 Ribosome 2
ppo03040 Spliceosome 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
ppo00460 Cyanoamino acid metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo00670 One carbon pool by folate 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03040 Spliceosome 4
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 5
ghi03015 mRNA surveillance pathway 5
ghi03040 Spliceosome 5
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi00564 Glycerophospholipid metabolism 4
ghi00565 Ether lipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 5
sbi00190 Oxidative phosphorylation 5
sbi03040 Spliceosome 3
sbi03015 mRNA surveillance pathway 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828706 100817448 100802089 101254606 4349406 100282383 100283534 103861600 100261643 18100778 18107551 11418634 11441151 123181657 123128241 123439185 107926280 107907369 106410792 8058065 102580072 102587078 102607227 100825327 107775003 107826371
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