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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100807971   mediator of RNA polymerase II transcription subunit 22a 
 gma-r.7   100807971   mediator of RNA polymerase II transcription subunit 22a 
 gma-m.5   100807971   mediator of RNA polymerase II transcription subunit 22a 
 gma-u.5   100787657   mediator of RNA polymerase II transcription subunit 22a 
 mtr-u.5   11446732   mediator of RNA polymerase II transcription subunit 22a 
 ppo-u.5   7462133   mediator of RNA polymerase II transcription subunit 22a 
 ath-u.5   MED22B   Surfeit locus protein 5 subunit 22 of Mediator complex 
 ath-u.5   AT1G16430   Surfeit locus protein 5 subunit 22 of Mediator complex 
 vvi-u.5   100253502   mediator of RNA polymerase II transcription subunit 22a 
 sly-u.5   101257248   mediator of RNA polymerase II transcription subunit 22a 
 osa-u.5   4325800   mediator of RNA polymerase II transcription subunit 22a 
 osa-u.5   4345849   mediator of RNA polymerase II transcription subunit 22a 
 zma-u.5   100284536   surfeit locus protein 5 

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Top 50 coexpressed genes to 100807971 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100807971 (gma-u.5 coexpression data)

CoexMap"100807971"


gmaLOC100807971 | Entrez gene ID : 100807971      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (75 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (217 genes)  IEA  
Protein XP_003546670.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_003546670.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_003546670.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100807971

.
gma-r.7
for
100807971

.
gma-m.5
for
100807971

.
gma-u.5
for
100787657

.
mtr-u.5
for
11446732

.
ppo-u.5
for
7462133

.
ath-u.5
for
MED22B

.
ath-u.5
for
AT1G16430

.
vvi-u.5
for
100253502

.
sly-u.5
for
101257248

.
osa-u.5
for
4325800

.
osa-u.5
for
4345849

.
zma-u.5
for
100284536

.


Ortholog ID: 8222
Species ath ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT1G16430 MED22B LOC100807971 LOC100787657 LOC101257248 LOC4325800 LOC4345849 LOC100284536 LOC103872434 LOC100253502 LOC7462133 LOC11446732 LOC123076936 LOC123059910 LOC123442548 LOC107910490 LOC107951581 LOC106346770 LOC106367456 CHLRE_07g349450v5 LOC8062122 LOC8061360 LOC102603738 LOC102609763 LOC100823677 LOC107822383 LOC107771518
Function* Surfeit locus protein 5 subunit 22 of Mediator complex Surfeit locus protein 5 subunit 22 of Mediator complex mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a surfeit locus protein 5 mediator of RNA polymerase II transcription subunit 22b mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a-like mediator of RNA polymerase II transcription subunit 22b mediator of RNA polymerase II transcription subunit 22b mediator of RNA polymerase II transcription subunit 22b-like mediator of RNA polymerase II transcription subunit 22b uncharacterized protein mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a-like mediator of RNA polymerase II transcription subunit 22b mediator of RNA polymerase II transcription subunit 22a mediator of RNA polymerase II transcription subunit 22a-like mediator of RNA polymerase II transcription subunit 22a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath00230 Purine metabolism 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03040 Spliceosome 5
gma03018 RNA degradation 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 6
bra03010 Ribosome 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00740 Riboflavin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 5
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi04144 Endocytosis 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi04144 Endocytosis 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 11
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
bna03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838213 837310 100807971 100787657 101257248 4325800 4345849 100284536 103872434 100253502 7462133 11446732 123076936 123059910 123442548 107910490 107951581 106346770 106367456 5718169 8062122 8061360 102603738 102609763 100823677 107822383 107771518
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