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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100808287   uncharacterized LOC100808287 
 gma-r.7   100808287   uncharacterized LOC100808287 
 gma-m.5   100808287   uncharacterized LOC100808287 
 gma-u.5   100500107   uncharacterized LOC100500107 
 mtr-u.5   11422212   uncharacterized LOC11422212 
 ppo-u.5   18105667   uncharacterized LOC18105667 
 ppo-u.5   7489802   uncharacterized LOC7489802 
 ath-u.5   AT5G53330   Ubiquitin-associated/translation elongation factor EF1B protein 
 vvi-u.5   100260370   uncharacterized LOC100260370 
 sly-u.5   101255960   uncharacterized LOC101255960 
 osa-u.5   4340205   uncharacterized LOC4340205 
 zma-u.5   100283915   uncharacterized LOC100283915 

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Top 50 coexpressed genes to 100808287 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808287 (gma-u.5 coexpression data)

CoexMap"100808287"


gmaLOC100808287 | Entrez gene ID : 100808287      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043162 [list] [network] ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway  (34 genes)  IEA  
GO CC
GO:0000813 [list] [network] ESCRT I complex  (15 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (111 genes)  IEA  
Protein NP_001240147.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 4  (predict for NP_001240147.1)
Subcellular
localization
TargetP
chlo 3,  mito 3,  other 3  (predict for NP_001240147.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100808287

.
gma-r.7
for
100808287

.
gma-m.5
for
100808287

.
gma-u.5
for
100500107

.
mtr-u.5
for
11422212

.
ppo-u.5
for
18105667

.
ppo-u.5
for
7489802

.
ath-u.5
for
AT5G53330

.
vvi-u.5
for
100260370

.
sly-u.5
for
101255960

.
osa-u.5
for
4340205

.
zma-u.5
for
100283915

.


Ortholog ID: 7377
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol AT5G53330 LOC100808287 LOC100500107 LOC101255960 LOC4340205 LOC100283915 LOC103857085 LOC100260370 LOC7489802 LOC18105667 LOC11422212 LOC123149863 LOC123156020 LOC123410930 LOC107930175 LOC107904578 LOC106387475 LOC106437514 LOC8070858 LOC102593582 LOC102605912 LOC102615282 LOC100825491 LOC107819525 LOC107823339
Function* Ubiquitin-associated/translation elongation factor EF1B protein uncharacterized LOC100808287 uncharacterized LOC100500107 uncharacterized LOC101255960 uncharacterized LOC4340205 uncharacterized LOC100283915 leucine-rich repeat extensin-like protein 5 uncharacterized LOC100260370 uncharacterized LOC7489802 uncharacterized LOC18105667 uncharacterized LOC11422212 facilitated trehalose transporter Tret1 proline-rich receptor-like protein kinase PERK10 proline-rich receptor-like protein kinase PERK10 uncharacterized LOC107930175 uncharacterized LOC107904578 neural Wiskott-Aldrich syndrome protein leucine-rich repeat extensin-like protein 5 uncharacterized LOC8070858 uncharacterized LOC102593582 uncharacterized LOC102605912 hypothetical protein uncharacterized LOC100825491 uncharacterized LOC107819525 uncharacterized LOC107823339
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04142 Lysosome 2
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 5
hvu03272 Virion - Hepatitis viruses 3
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 8
ghi03272 Virion - Hepatitis viruses 8
ghi04144 Endocytosis 8
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 3
nta00071 Fatty acid degradation 2
nta00592 alpha-Linolenic acid metabolism 2
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta04144 Endocytosis 2
nta04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835414 100808287 100500107 101255960 4340205 100283915 103857085 100260370 7489802 18105667 11422212 123149863 123156020 123410930 107930175 107904578 106387475 106437514 8070858 102593582 102605912 102615282 100825491 107819525 107823339
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