ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100809407	uncharacterized LOC100809407
gma-r.7	100809407	uncharacterized LOC100809407
gma-u.5	100816046	uncharacterized LOC100816046
gma-u.5	100812434	uncharacterized LOC100812434
gma-u.5	100306240	uncharacterized LOC100306240
mtr-u.5	25489108	uncharacterized LOC25489108
mtr-u.5	11407168	uncharacterized LOC11407168
ppo-u.5	7453592	uncharacterized LOC7453592
ppo-u.5	7487534	uncharacterized LOC7487534
ppo-u.5	7495630	uncharacterized LOC7495630
ath-u.5	AT5G55600	Agenet and bromo-adjacent homology (BAH) domain-containing protein
bra-r.6	103845003	uncharacterized LOC103845003
bra-r.6	103856977	uncharacterized LOC103856977
vvi-u.5	100265203	uncharacterized LOC100265203
vvi-u.5	104878146	uncharacterized LOC104878146
ghi-r.1	107922045	uncharacterized LOC107922045
ghi-r.1	107917838	uncharacterized LOC107917838
bna-r.1	106390903	uncharacterized LOC106390903
bna-r.1	106371402	uncharacterized LOC106371402
bna-r.1	125600726	uncharacterized LOC125600726
cit-r.1	102614334	uncharacterized LOC102614334
cit-r.1	102616727	uncharacterized LOC102616727
sly-u.5	101252099	uncharacterized LOC101252099
sot-r.1	102589315	uncharacterized LOC102589315
nta-r.1	107823461	uncharacterized LOC107823461
nta-r.1	107819009	uncharacterized LOC107819009
nta-r.1	107766548	uncharacterized LOC107766548
osa-u.5	9269932	uncharacterized LOC9269932
zma-u.5	100383244	agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein
tae-r.2	123052133	uncharacterized LOC123052133
tae-r.2	123044253	uncharacterized LOC123044253
tae-r.2	123187993	uncharacterized LOC123187993
hvu-r.1	123425369	uncharacterized LOC123425369
sbi-r.1	8060666	uncharacterized LOC8060666
bdi-r.1	100833465	uncharacterized LOC100833465

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003682 [list] [network] chromatin binding

(270 genes)

IEA

Protein

XP_003532169.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1

(predict for XP_003532169.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_003532169.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100809407	gma-r.7 for 100809407	gma-u.5 for 100816046	gma-u.5 for 100812434	gma-u.5 for 100306240	mtr-u.5 for 25489108	mtr-u.5 for 11407168	ppo-u.5 for 7453592	ppo-u.5 for 7487534	ppo-u.5 for 7495630	ath-u.5 for AT5G55600	bra-r.6 for 103845003	bra-r.6 for 103856977	vvi-u.5 for 100265203	vvi-u.5 for 104878146	ghi-r.1 for 107922045	ghi-r.1 for 107917838	bna-r.1 for 106390903	bna-r.1 for 106371402	bna-r.1 for 125600726	cit-r.1 for 102614334	cit-r.1 for 102616727	sly-u.5 for 101252099	sot-r.1 for 102589315	nta-r.1 for 107823461	nta-r.1 for 107819009	nta-r.1 for 107766548	osa-u.5 for 9269932	zma-u.5 for 100383244	tae-r.2 for 123052133	tae-r.2 for 123044253	tae-r.2 for 123187993	hvu-r.1 for 123425369	sbi-r.1 for 8060666	bdi-r.1 for 100833465

Ortholog

Ortholog ID: 6105

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100816046

uncharacterized LOC100812434

uncharacterized LOC100306240

uncharacterized LOC25489108

uncharacterized LOC11407168

uncharacterized LOC7453592

uncharacterized LOC7487534

uncharacterized LOC7495630

Agenet and bromo-adjacent homology (BAH) domain-containing protein

uncharacterized LOC103845003

uncharacterized LOC103856977

uncharacterized LOC100265203

uncharacterized LOC104878146

uncharacterized LOC107922045

uncharacterized LOC107917838

uncharacterized LOC106390903

uncharacterized LOC106371402

uncharacterized LOC125600726

uncharacterized LOC102614334

uncharacterized LOC102616727

uncharacterized LOC101252099

uncharacterized LOC102589315

uncharacterized LOC107823461

uncharacterized LOC107819009

uncharacterized LOC107766548

uncharacterized LOC9269932

agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein

uncharacterized LOC123052133

uncharacterized LOC123044253

uncharacterized LOC123187993

uncharacterized LOC123425369

uncharacterized LOC8060666

uncharacterized LOC100833465

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00051	Fructose and mannose metabolism	2
nta00230	Purine metabolism	2
nta00500	Starch and sucrose metabolism	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03083	Polycomb repressive complex	2

Expression

Expression pattern

Entrez Gene ID^*

100816046

100812434

100306240

25489108

11407168

7453592

7487534

7495630

835654

103845003

103856977

100265203

104878146

107922045

107917838

106390903

106371402

125600726

102614334

102616727

101252099

102589315

107823461

107819009

107766548

9269932

100383244

123052133

123044253

123187993

123425369

8060666

100833465

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100809407 (gma-u.5 coexpression data)

Top 50 enrichment test to 100809407 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	1	2	2	2	3	2	1	1	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100809407 (gma-u.5 coexpression data)

Top 50 enrichment test to 100809407 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**