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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100810213   TATA-box-binding protein-like 
 gma-r.7   100810213   TATA-box-binding protein-like 
 gma-u.5   100810845   TATA-box-binding protein 
 gma-u.5   100790566   TATA-box-binding protein 
 gma-u.5   100804848   TATA-box-binding protein 
 mtr-u.5   25489234   TATA-box-binding protein 
 mtr-u.5   25498820   TATA-box-binding protein 
 mtr-u.5   25491712   TATA-box-binding protein 
 ppo-u.5   7453590   uncharacterized LOC7453590 
 ath-u.5   TBP2   TATA binding protein 2 
 ath-u.5   TBP1   TATA binding protein 1 
 bra-r.6   103829778   TATA-box-binding protein 2 
 bra-r.6   103832582   TATA-box-binding protein 2 
 bra-r.6   103870134   TATA-box-binding protein 1 
 vvi-u.5   100243302   TATA-box-binding protein 
 ghi-r.1   107942849   TATA-box-binding protein 
 ghi-r.1   107888498   TATA-box-binding protein 
 ghi-r.1   107893254   TATA-box-binding protein 
 bna-r.1   106402668   TATA-box-binding protein 2 
 bna-r.1   106440595   TATA-box-binding protein 1 
 bna-r.1   106360359   TATA-box-binding protein 2 
 cit-r.1   102614840   TATA-box-binding protein 2 
 sly-u.5   101254627   TATA-box-binding protein 
 sot-r.1   102596656   TATA-box-binding protein-like 
 sot-r.1   102583666   TATA-box-binding protein-like 
 nta-r.1   107765382   TATA-box-binding protein 
 nta-r.1   107789091   TATA-box-binding protein 
 nta-r.1   107789182   TATA-box-binding protein-like 
 osa-u.5   4352633   TATA-binding protein 2-like 
 osa-u.5   4333619   TATA-binding protein 2-like 
 osa-u.5   4348699   TATA-binding protein 2-like 
 zma-u.5   542241   TATA-binding protein 2 
 tae-r.2   123117809   TATA-box-binding protein 1 
 tae-r.2   123110157   TATA-box-binding protein 2 
 hvu-r.1   123429269   TATA-box-binding protein 1 
 hvu-r.1   123446934   TATA-binding protein 2 
 hvu-r.1   123452199   TATA-box-binding protein 2-like 
 sbi-r.1   8056767   TATA-box-binding protein 2 
 bdi-r.1   100832670   TATA-box-binding protein 1 
 bdi-r.1   100836217   TATA-binding protein 2 
 bdi-r.1   100837002   TATA-binding protein 2 
 cre-r.1   CHLRE_12g505700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100810213 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100810213 (gma-u.5 coexpression data)

CoexMap"100810213"


gmaLOC100810213 | Entrez gene ID : 100810213    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 1 2 3 1 3 3 1 1 2 3 3 1 2 3 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03022 [list] [network] Basal transcription factors (90 genes)
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (123 genes)  IEA  
GO CC
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (39 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein NP_001242795.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for NP_001242795.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001242795.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100810213
gma-r.7
for
100810213
gma-u.5
for
100810845
gma-u.5
for
100790566
gma-u.5
for
100804848
mtr-u.5
for
25489234
mtr-u.5
for
25498820
mtr-u.5
for
25491712
ppo-u.5
for
7453590
ath-u.5
for
TBP2
ath-u.5
for
TBP1
bra-r.6
for
103829778
bra-r.6
for
103832582
bra-r.6
for
103870134
vvi-u.5
for
100243302
ghi-r.1
for
107942849
ghi-r.1
for
107888498
ghi-r.1
for
107893254
bna-r.1
for
106402668
bna-r.1
for
106440595
bna-r.1
for
106360359
cit-r.1
for
102614840
sly-u.5
for
101254627
sot-r.1
for
102596656
sot-r.1
for
102583666
nta-r.1
for
107765382
nta-r.1
for
107789091
nta-r.1
for
107789182
osa-u.5
for
4352633
osa-u.5
for
4333619
osa-u.5
for
4348699
zma-u.5
for
542241
tae-r.2
for
123117809
tae-r.2
for
123110157
hvu-r.1
for
123429269
hvu-r.1
for
123446934
hvu-r.1
for
123452199
sbi-r.1
for
8056767
bdi-r.1
for
100832670
bdi-r.1
for
100836217
bdi-r.1
for
100837002
cre-r.1
for
CHLRE_12g505700v5


Ortholog ID: 1741
Species gma gma gma mtr mtr mtr ppo ath ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot sot nta nta nta osa osa osa zma zma tae tae tae hvu hvu hvu sbi bdi bdi bdi cre
Symbol LOC100810845 LOC100790566 TBP1 LOC25489234 LOC25491712 LOC25489244 LOC7453590 TBP2 TBP1 LOC103829778 LOC103832582 LOC100243302 LOC107893254 LOC107894606 LOC107899139 LOC106360359 LOC125577229 LOC106452274 LOC102614840 LOC101254627 LOC102596656 LOC102583666 LOC107789091 LOC107789182 LOC142176366 LOC4352633 LOC4333619 LOC4348699 LOC542241 LOC542240 LOC123110157 LOC123095622 LOC123102038 LOC123429269 LOC123446934 LOC123452199 LOC8086107 LOC100832670 LOC100836217 LOC100837002 CHLRE_12g505700v5
Function* TATA-box-binding protein TATA-box-binding protein TATA-box binding protein TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein uncharacterized LOC7453590 TATA binding protein 2 TATA binding protein 1 TATA-box-binding protein 2 TATA-box-binding protein 2 TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein TATA-box-binding protein 2 TATA-box-binding protein 2-like TATA-box-binding protein 1 TATA-box-binding protein 2 TATA-box-binding protein TATA-box-binding protein-like TATA-box-binding protein-like TATA-box-binding protein TATA-box-binding protein-like TATA-box-binding protein-like TATA-binding protein 2-like TATA-binding protein 2-like TATA-binding protein 2-like TATA-binding protein 2 TATA-binding protein 1 TATA-box-binding protein 2 TATA-box-binding protein 2 TATA-box-binding protein 2-like TATA-box-binding protein 1 TATA-binding protein 2 TATA-box-binding protein 2-like TATA-box-binding protein 2 TATA-box-binding protein 1 TATA-binding protein 2 TATA-binding protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 5
gma03040 Spliceosome 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 5
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr04981 Folate transport and metabolism 2
mtr03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03022 Basal transcription factors 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot03022 Basal transcription factors 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 4
nta03022 Basal transcription factors 2
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 4
nta00564 Glycerophospholipid metabolism 4
nta04130 SNARE interactions in vesicular transport 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
nta03040 Spliceosome 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
osa03022 Basal transcription factors 3
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03083 Polycomb repressive complex 3
zma04712 Circadian rhythm - plant 3
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma04144 Endocytosis 2
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 5
tae03022 Basal transcription factors 3
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
sbi03022 Basal transcription factors 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
cre04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100810845 100790566 547805 25489234 25491712 25489244 7453590 841999 820546 103829778 103832582 100243302 107893254 107894606 107899139 106360359 125577229 106452274 102614840 101254627 102596656 102583666 107789091 107789182 142176366 4352633 4333619 4348699 542241 542240 123110157 123095622 123102038 123429269 123446934 123452199 8086107 100832670 100836217 100837002 5716470
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