ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100810231	putative uncharacterized protein DDB_G0271606
gma-r.7	100810231	putative uncharacterized protein DDB_G0271606
gma-m.5	100810231	putative uncharacterized protein DDB_G0271606
gma-u.5	100782293	atrophin-1
gma-u.5	100782994	basic salivary proline-rich protein 4
gma-u.5	100527106	protein tfg-1
mtr-u.5	25487656	leucine-rich repeat extensin-like protein 5
mtr-u.5	25479434	trithorax group protein osa
ppo-u.5	18104636	uncharacterized LOC18104636
ppo-u.5	7498098	transcriptional regulator DEF1
ath-u.5	AT4G28300	formin-like protein (DUF1421)
bra-r.6	103834768	trithorax group protein osa
bra-r.6	103861823	basic salivary proline-rich protein 1
bra-r.6	103868012	basic salivary proline-rich protein 1
vvi-u.5	100264321	uncharacterized LOC100264321
ghi-r.1	121228212	leucine-rich repeat extensin-like protein 5
ghi-r.1	107909294	putative uncharacterized protein DDB_G0290521
ghi-r.1	107898955	pollen-specific leucine-rich repeat extensin-like protein 1
bna-r.1	106452853	ETS translocation variant 5-like
bna-r.1	106415937	protein tfg-1
bna-r.1	106376164	proline-rich protein LAS17-like
cit-r.1	102607210	pollen-specific leucine-rich repeat extensin-like protein 1
sly-u.5	101263763	uncharacterized LOC101263763
sly-u.5	101268882	uncharacterized LOC101268882
sot-r.1	102595033	mediator of RNA polymerase II transcription subunit 15-like
sot-r.1	102588898	mediator of RNA polymerase II transcription subunit 15-like
nta-r.1	107772742	uncharacterized LOC107772742
nta-r.1	107793035	uncharacterized LOC107793035
nta-r.1	107816617	uncharacterized LOC107816617
osa-u.5	4325133	altered inheritance of mitochondria protein 3
zma-u.5	100383096	Putative DUF1421 domain family protein
tae-r.2	123062088	basic salivary proline-rich protein 1
tae-r.2	123070813	mediator of RNA polymerase II transcription subunit 15
tae-r.2	123079205	protein tfg-1
hvu-r.1	123444437	protein enabled
sbi-r.1	8075592	basic salivary proline-rich protein 1
cre-r.1	CHLRE_13g590650v5	uncharacterized protein

Top 50 coexpressed genes to 100810231 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100810231 (gma-u.5 coexpression data)

CoexMap"100810231"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003539922.1 [sequence] [blastp]
XP_006592435.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_003539922.1)
nucl 9	(predict for XP_006592435.1)

Subcellular
localization
TargetP

other 7	(predict for XP_003539922.1)
other 7	(predict for XP_006592435.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100810231	gma-r.7 for 100810231	gma-m.5 for 100810231	gma-u.5 for 100782293	gma-u.5 for 100782994	gma-u.5 for 100527106	mtr-u.5 for 25487656	mtr-u.5 for 25479434	ppo-u.5 for 18104636	ppo-u.5 for 7498098	ath-u.5 for AT4G28300	bra-r.6 for 103834768	bra-r.6 for 103861823	bra-r.6 for 103868012	vvi-u.5 for 100264321	ghi-r.1 for 121228212	ghi-r.1 for 107909294	ghi-r.1 for 107898955	bna-r.1 for 106452853	bna-r.1 for 106415937	bna-r.1 for 106376164	cit-r.1 for 102607210	sly-u.5 for 101263763	sly-u.5 for 101268882	sot-r.1 for 102595033	sot-r.1 for 102588898	nta-r.1 for 107772742	nta-r.1 for 107793035	nta-r.1 for 107816617	osa-u.5 for 4325133	zma-u.5 for 100383096	tae-r.2 for 123062088	tae-r.2 for 123070813	tae-r.2 for 123079205	hvu-r.1 for 123444437	sbi-r.1 for 8075592	cre-r.1 for CHLRE_13g590650v5

Ortholog

Ortholog ID: 4960

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

cre

Symbol

Function^*

atrophin-1

basic salivary proline-rich protein 4

protein tfg-1

leucine-rich repeat extensin-like protein 5

trithorax group protein osa

uncharacterized LOC18104636

transcriptional regulator DEF1

formin-like protein (DUF1421)

trithorax group protein osa

basic salivary proline-rich protein 1

uncharacterized LOC100264321

leucine-rich repeat extensin-like protein 5

putative uncharacterized protein DDB_G0290521

pollen-specific leucine-rich repeat extensin-like protein 1

ETS translocation variant 5-like

protein tfg-1

trithorax group protein osa-like

pollen-specific leucine-rich repeat extensin-like protein 1

uncharacterized LOC101263763

uncharacterized LOC101268882

mediator of RNA polymerase II transcription subunit 15-like

uncharacterized LOC107772742

uncharacterized LOC107793035

uncharacterized LOC107826716

altered inheritance of mitochondria protein 3

Putative DUF1421 domain family protein

basic salivary proline-rich protein 1

mediator of RNA polymerase II transcription subunit 15

protein tfg-1

protein enabled

basic salivary proline-rich protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	9
gma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	6
gma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	3
ppo00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath03250	Viral life cycle - HIV-1	2
ath03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4
bra04144	Endocytosis	4
bra03250	Viral life cycle - HIV-1	2
bra03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	5
bra03250	Viral life cycle - HIV-1	4
bra03272	Virion - Hepatitis viruses	4
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	3
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	7
cre03272	Virion - Hepatitis viruses	4
cre03250	Viral life cycle - HIV-1	3

Expression

Expression pattern

Entrez Gene ID^*

100782293

100782994

100527106

25487656

25479434

18104636

7498098

828945

103834768

103861823

103868012

100264321

121228212

107909294

107898955

106452853

106415937

125577052

102607210

101263763

101268882

102595033

102588898

107772742

107793035

107826716

4325133

100383096

123062088

123070813

123079205

123444437

8075592

5718636

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	cre	bdi
Paralog	6	2	2	1	3	1	3	3	1	2	2	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100810231 (gma-u.5 coexpression data)

Top 50 enrichment test to 100810231 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**