ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100811352	probable GMP synthase [glutamine-hydrolyzing]
gma-r.7	100811352	probable GMP synthase [glutamine-hydrolyzing]
gma-u.5	100793991	uncharacterized LOC100793991
gma-u.5	100793449	uncharacterized LOC100793449
gma-u.5	100791725	probable GMP synthase [glutamine-hydrolyzing]
mtr-u.5	25502437	probable GMP synthase [glutamine-hydrolyzing]
mtr-u.5	11445011	uncharacterized LOC11445011
ppo-u.5	7481612	uncharacterized LOC7481612
ppo-u.5	7497551	uncharacterized LOC7497551
ppo-u.5	7491462	uncharacterized LOC7491462
ath-u.5	AT3G12710	DNA glycosylase superfamily protein
ath-u.5	AT5G44680	DNA glycosylase superfamily protein
bra-r.6	103848479	DNA-3-methyladenine glycosylase 1
bra-r.6	117133034	DNA-3-methyladenine glycosylase 1
bra-r.6	103870233	DNA-3-methyladenine glycosylase 1
vvi-u.5	100256507	uncharacterized LOC100256507
ghi-r.1	107917882	probable GMP synthase [glutamine-hydrolyzing]
ghi-r.1	107922225	probable GMP synthase [glutamine-hydrolyzing]
bna-r.1	106366600	DNA-3-methyladenine glycosylase 1-like
bna-r.1	106377484	DNA-3-methyladenine glycosylase 1-like
bna-r.1	106381347	DNA-3-methyladenine glycosylase 1
cit-r.1	102621461	hypothetical protein
cit-r.1	102614205	hypothetical protein
sly-u.5	101258999	uncharacterized LOC101258999
sly-u.5	101246304	uncharacterized LOC101246304
sot-r.1	102594852	uncharacterized LOC102594852
sot-r.1	102598399	DNA-3-methyladenine glycosylase 1-like
nta-r.1	107828930	uncharacterized LOC107828930
nta-r.1	107820753	uncharacterized LOC107820753
nta-r.1	107798986	uncharacterized LOC107798986
osa-u.5	4327631	uncharacterized LOC4327631
zma-u.5	100284031	DNA-3-methyladenine glycosylase I
zma-u.5	100191724	DNA glycosylase superfamily protein
tae-r.2	123071079	uncharacterized LOC123071079
tae-r.2	123079443	uncharacterized LOC123079443
tae-r.2	123062307	uncharacterized LOC123062307
hvu-r.1	123444616	uncharacterized LOC123444616
sbi-r.1	8055246	uncharacterized LOC8055246
bdi-r.1	100836431	probable GMP synthase [glutamine-hydrolyzing]

Top 50 coexpressed genes to 100811352 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100811352 (gma-u.5 coexpression data)

CoexMap"100811352"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx03410 [list] [network] Base excision repair (77 genes)

GO BP

GO:0006284 [list] [network] base-excision repair

(54 genes)

IEA

GO CC

GO MF

GO:0008725 [list] [network] DNA-3-methyladenine glycosylase activity

(17 genes)

IEA

Protein

XP_003546838.1 [sequence] [blastp]
XP_014623693.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_003546838.1)
chlo 8, mito 1, plas 1, extr 1, mito_plas 1	(predict for XP_014623693.1)

Subcellular
localization
TargetP

chlo 4	(predict for XP_003546838.1)
chlo 4	(predict for XP_014623693.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100811352	gma-r.7 for 100811352	gma-u.5 for 100793991	gma-u.5 for 100793449	gma-u.5 for 100791725	mtr-u.5 for 25502437	mtr-u.5 for 11445011	ppo-u.5 for 7481612	ppo-u.5 for 7497551	ppo-u.5 for 7491462	ath-u.5 for AT3G12710	ath-u.5 for AT5G44680	bra-r.6 for 103848479	bra-r.6 for 117133034	bra-r.6 for 103870233	vvi-u.5 for 100256507	ghi-r.1 for 107917882	ghi-r.1 for 107922225	bna-r.1 for 106366600	bna-r.1 for 106377484	bna-r.1 for 106381347	cit-r.1 for 102621461	cit-r.1 for 102614205	sly-u.5 for 101258999	sly-u.5 for 101246304	sot-r.1 for 102594852	sot-r.1 for 102598399	nta-r.1 for 107828930	nta-r.1 for 107820753	nta-r.1 for 107798986	osa-u.5 for 4327631	zma-u.5 for 100284031	zma-u.5 for 100191724	tae-r.2 for 123071079	tae-r.2 for 123079443	tae-r.2 for 123062307	hvu-r.1 for 123444616	sbi-r.1 for 8055246	bdi-r.1 for 100836431

Ortholog

Ortholog ID: 3799

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

probable GMP synthase [glutamine-hydrolyzing]

uncharacterized LOC100793449

DNA-3-methyladenine glycosylase 1

probable GMP synthase [glutamine-hydrolyzing]

uncharacterized LOC11445011

uncharacterized LOC7481612

uncharacterized LOC7497551

uncharacterized LOC7491462

DNA glycosylase superfamily protein

DNA-3-methyladenine glycosylase 1

uncharacterized LOC100256507

probable GMP synthase [glutamine-hydrolyzing]

DNA-3-methyladenine glycosylase 1-like

DNA-3-methyladenine glycosylase 1

hypothetical protein

uncharacterized LOC101258999

uncharacterized LOC101246304

uncharacterized LOC102594852

DNA-3-methyladenine glycosylase 1-like

uncharacterized LOC107828930

uncharacterized LOC107798986

uncharacterized LOC107797274

uncharacterized LOC4327631

DNA-3-methyladenine glycosylase I

DNA glycosylase superfamily protein

uncharacterized LOC123071079

uncharacterized LOC123079443

uncharacterized LOC123062307

uncharacterized LOC123444616

uncharacterized LOC8055246

probable GMP synthase [glutamine-hydrolyzing]

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	4
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2
bra03410	Base excision repair	2
bra00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	3
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5
sot03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2
zma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03410	Base excision repair	3
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	9
tae03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	9
tae03410	Base excision repair	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100811352

100793449

100789505

25502437

11445011

7481612

7497551

7491462

820453

834497

103848479

117133034

103870233

100256507

107917882

107922225

106377484

106381347

106389855

102621461

102614205

101258999

101246304

102594852

102598399

107828930

107798986

107797274

4327631

100284031

100191724

123071079

123079443

123062307

123444616

8055246

100836431

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	2	3	1	2	3	2	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100811352 (gma-u.5 coexpression data)

Top 50 enrichment test to 100811352 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**