ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100798696	GABA transporter 1
gma-u.5	100793688	GABA transporter 1
mtr-u.5	11428482	GABA transporter 1
mtr-u.5	25492317	GABA transporter 1
mtr-u.5	25485803	GABA transporter 1
ppo-u.5	7474930	GABA transporter 1
ppo-u.5	7479837	GABA transporter 1
ppo-u.5	7494902	GABA transporter 1
ath-u.5	AT1G08230	Transmembrane amino acid transporter family protein
vvi-u.5	100245453	GABA transporter 1
vvi-u.5	100246547	GABA transporter 1
vvi-u.5	100266039	GABA transporter 1
sly-u.5	101245324	GABA transporter 1
osa-u.5	4324757	GABA transporter 1
zma-u.5	103650987	GABA transporter 1

functional annotation

KEGG

GO BP

GO:0015812 [list] [network] gamma-aminobutyric acid transport	(10 genes)	IEA
GO:0003333 [list] [network] amino acid transmembrane transport	(132 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(1870 genes)

IEA

GO MF

GO:0015185 [list] [network] gamma-aminobutyric acid transmembrane transporter activity

(10 genes)

IEA

Protein

XP_003539454.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 3, nucl_plas 3, golg_plas 3, cysk_plas 3, E.R._plas 3, mito_plas 3

(predict for XP_003539454.1)

Subcellular
localization
TargetP

other 7

(predict for XP_003539454.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100798696	gma-u.5 for 100793688	mtr-u.5 for 11428482	mtr-u.5 for 25492317	mtr-u.5 for 25485803	ppo-u.5 for 7474930	ppo-u.5 for 7479837	ppo-u.5 for 7494902	ath-u.5 for AT1G08230	vvi-u.5 for 100245453	vvi-u.5 for 100246547	vvi-u.5 for 100266039	sly-u.5 for 101245324	osa-u.5 for 4324757	zma-u.5 for 103650987

Ortholog ID: 5189

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

GABA transporter 1

Transmembrane amino acid transporter family protein

GABA transporter 1

GABA transporter 1-like

GABA transporter 1

GABA transporter 1-like

GABA transporter 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	3
gma00564	Glycerophospholipid metabolism	3
gma00565	Ether lipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2
mtr04016	MAPK signaling pathway - plant	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	3
ath00460	Cyanoamino acid metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2
ath04146	Peroxisome	2
ath00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	8
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
vvi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
vvi00940	Phenylpropanoid biosynthesis	2
vvi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	5
ghi00190	Oxidative phosphorylation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	5
ghi00190	Oxidative phosphorylation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01040	Biosynthesis of unsaturated fatty acids	9
sot01212	Fatty acid metabolism	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	10
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	6
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	4
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2
hvu00941	Flavonoid biosynthesis	2
hvu00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2
sbi00543	Exopolysaccharide biosynthesis	2
sbi00920	Sulfur metabolism	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00250	Alanine, aspartate and glutamate metabolism	4
bdi00410	beta-Alanine metabolism	4
bdi00430	Taurine and hypotaurine metabolism	4
bdi00650	Butanoate metabolism	4
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100791114

25492317

11428482

7479837

7474930

837344

103836399

100246547

100266039

121206120

107891641

106433189

106362278

102620655

101245324

102596218

102589340

107769938

107780497

4324757

103650987

123062653

123079810

123444852

8058937

100836626

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100798696 (gma-u.5 coexpression data)

Top 50 enrichment test to 100798696 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	3	3	1	3	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100798696 (gma-u.5 coexpression data)

Top 50 enrichment test to 100798696 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**