ATTED-II : GeneCoexpression result

Species	Gene	Description
sot-r.1	102589340	GABA transporter 1
sot-r.1	102596218	GABA transporter 1-like
sly-u.5	101245324	GABA transporter 1
nta-r.1	107780497	GABA transporter 1
nta-r.1	107769938	GABA transporter 1-like
ath-u.5	AT1G08230	Transmembrane amino acid transporter family protein
gma-u.5	100791114	GABA transporter 1
gma-u.5	100792470	GABA transporter 1
bra-r.6	103836399	GABA transporter 1
vvi-u.5	100246547	GABA transporter 1
vvi-u.5	100266050	GABA transporter 1
vvi-u.5	100266039	GABA transporter 1
ppo-u.5	7494902	GABA transporter 1
ppo-u.5	7474930	GABA transporter 1
ppo-u.5	7479837	GABA transporter 1
mtr-u.5	11428482	GABA transporter 1
mtr-u.5	25485803	GABA transporter 1
mtr-u.5	25492317	GABA transporter 1
ghi-r.1	107927542	GABA transporter 1
ghi-r.1	107959513	GABA transporter 1
ghi-r.1	107891642	GABA transporter 1
bna-r.1	106433189	GABA transporter 1
bna-r.1	106362278	GABA transporter 1
cit-r.1	102620655	GABA transporter 1
osa-u.5	4324757	GABA transporter 1
zma-u.5	103650987	GABA transporter 1
tae-r.2	123079810	GABA transporter 1
tae-r.2	123071474	GABA transporter 1
tae-r.2	123062653	GABA transporter 1
hvu-r.1	123444852	GABA transporter 1
sbi-r.1	8058937	GABA transporter 1
bdi-r.1	100836626	GABA transporter 1

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_006349074.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, chlo 1, nucl 1, vacu 1, E.R. 1, cyto_nucl 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1

(predict for XP_006349074.1)

Subcellular
localization
TargetP

other 9

(predict for XP_006349074.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for 102589340	sot-r.1 for 102596218	sly-u.5 for 101245324	nta-r.1 for 107780497	nta-r.1 for 107769938	ath-u.5 for AT1G08230	gma-u.5 for 100791114	gma-u.5 for 100792470	bra-r.6 for 103836399	vvi-u.5 for 100246547	vvi-u.5 for 100266050	vvi-u.5 for 100266039	ppo-u.5 for 7494902	ppo-u.5 for 7474930	ppo-u.5 for 7479837	mtr-u.5 for 11428482	mtr-u.5 for 25485803	mtr-u.5 for 25492317	ghi-r.1 for 107927542	ghi-r.1 for 107959513	ghi-r.1 for 107891642	bna-r.1 for 106433189	bna-r.1 for 106362278	cit-r.1 for 102620655	osa-u.5 for 4324757	zma-u.5 for 103650987	tae-r.2 for 123079810	tae-r.2 for 123071474	tae-r.2 for 123062653	hvu-r.1 for 123444852	sbi-r.1 for 8058937	bdi-r.1 for 100836626

Ortholog

Ortholog ID: 5189

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

GABA transporter 1

GABA transporter 1-like

GABA transporter 1

GABA transporter 1-like

Transmembrane amino acid transporter family protein

GABA transporter 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01040	Biosynthesis of unsaturated fatty acids	9
sot01212	Fatty acid metabolism	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	3
ath00460	Cyanoamino acid metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2
ath04146	Peroxisome	2
ath00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	3
gma00564	Glycerophospholipid metabolism	3
gma00565	Ether lipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	4
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	8
vvi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
vvi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
vvi00940	Phenylpropanoid biosynthesis	2
vvi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00052	Galactose metabolism	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2
mtr04016	MAPK signaling pathway - plant	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00460	Cyanoamino acid metabolism	5
mtr00500	Starch and sucrose metabolism	5
mtr00999	Biosynthesis of various plant secondary metabolites	5
mtr02010	ABC transporters	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	3
ghi00190	Oxidative phosphorylation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	5
ghi00190	Oxidative phosphorylation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	5
ghi00190	Oxidative phosphorylation	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	6
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	5
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	10
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	4
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2
hvu00941	Flavonoid biosynthesis	2
hvu00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2
sbi00543	Exopolysaccharide biosynthesis	2
sbi00920	Sulfur metabolism	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00250	Alanine, aspartate and glutamate metabolism	4
bdi00410	beta-Alanine metabolism	4
bdi00430	Taurine and hypotaurine metabolism	4
bdi00650	Butanoate metabolism	4
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

102589340

102596218

101245324

107780497

107769938

837344

100791114

100793688

103836399

100246547

100266050

100266039

7494902

7474930

7479837

11428482

25485803

25492317

107891642

107891641

121206120

106433189

106362278

102620655

4324757

103650987

123079810

123071474

123062653

123444852

8058937

100836626

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 102589340 (sot-r.1 coexpression data)

Top 50 enrichment test to 102589340 (sot-r.1 coexpression data)


Species	sot	sly	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	2	1	2	1	3	3	3	3	2	1	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 102589340 (sot-r.1 coexpression data)

Top 50 enrichment test to 102589340 (sot-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**