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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100811579   rop guanine nucleotide exchange factor 3 
 gma-r.7   100811579   rop guanine nucleotide exchange factor 3 
 gma-u.5   100785956   rop guanine nucleotide exchange factor 3 
 gma-u.5   100806086   rop guanine nucleotide exchange factor 3 
 mtr-u.5   11436941   rop guanine nucleotide exchange factor 3 
 mtr-u.5   25500877   rop guanine nucleotide exchange factor 3 
 ppo-u.5   18096355   rop guanine nucleotide exchange factor 3 
 ath-u.5   ROPGEF4   RHO guanyl-nucleotide exchange factor 4 
 ath-u.5   ROPGEF3   RHO guanyl-nucleotide exchange factor 3 
 ath-u.5   ROPGEF2   RHO guanyl-nucleotide exchange factor 2 
 bra-r.6   103858869   rop guanine nucleotide exchange factor 3 
 bra-r.6   103866931   rop guanine nucleotide exchange factor 4 
 ghi-r.1   107923776   rop guanine nucleotide exchange factor 3 
 ghi-r.1   107943230   rop guanine nucleotide exchange factor 3 
 ghi-r.1   107911521   rop guanine nucleotide exchange factor 3 
 bna-r.1   106450940   rop guanine nucleotide exchange factor 4 
 bna-r.1   106388710   rop guanine nucleotide exchange factor 3-like 
 cit-r.1   102624946   rop guanine nucleotide exchange factor 3 
 cit-r.1   127900642   rop guanine nucleotide exchange factor 3-like 
 sly-u.5   101255922   rop guanine nucleotide exchange factor 3 
 nta-r.1   107811117   rop guanine nucleotide exchange factor 3-like 
 nta-r.1   107760675   rop guanine nucleotide exchange factor 2 
 osa-u.5   4336643   rop guanine nucleotide exchange factor 3 
 osa-u.5   4349314   rop guanine nucleotide exchange factor 3 
 zma-u.5   100191669   pollen-specific kinase partner protein 
 zma-u.5   103633172   rop guanine nucleotide exchange factor 3 
 zma-u.5   100382507   Rop guanine nucleotide exchange factor 2 
 hvu-r.1   123427527   rop guanine nucleotide exchange factor 3-like 
 sbi-r.1   8064641   rop guanine nucleotide exchange factor 3 
 bdi-r.1   100826205   rop guanine nucleotide exchange factor 3 
 bdi-r.1   100837707   rop guanine nucleotide exchange factor 3 
 bdi-r.1   100843835   rop guanine nucleotide exchange factor 3 

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Top 50 coexpressed genes to 100811579 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100811579 (gma-u.5 coexpression data)

CoexMap"100811579"


gmaLOC100811579 | Entrez gene ID : 100811579      
Species gma mtr ppo ath bra ghi bna cit sly nta osa zma hvu sbi bdi vvi sot cre tae
Paralog 4 2 1 3 2 3 2 2 1 2 2 3 1 1 3 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (76 genes)  IEA  
Protein XP_003534562.1 [sequence] [blastp]
XP_006587854.1 [sequence] [blastp]
XP_014617899.1 [sequence] [blastp]
XP_040861110.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  nucl_plas 2,  chlo 1,  pero 1  (predict for XP_003534562.1)
cyto 4,  nucl 4,  pero 1  (predict for XP_006587854.1)
cyto 4,  nucl 4,  pero 1  (predict for XP_014617899.1)
cyto 4,  nucl 4,  pero 1  (predict for XP_040861110.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_003534562.1)
other 7,  chlo 4  (predict for XP_006587854.1)
other 7,  chlo 4  (predict for XP_014617899.1)
other 7,  chlo 4  (predict for XP_040861110.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100811579
gma-r.7
for
100811579
gma-u.5
for
100785956
gma-u.5
for
100806086
mtr-u.5
for
11436941
mtr-u.5
for
25500877
ppo-u.5
for
18096355
ath-u.5
for
ROPGEF4
ath-u.5
for
ROPGEF3
ath-u.5
for
ROPGEF2
bra-r.6
for
103858869
bra-r.6
for
103866931
ghi-r.1
for
107923776
ghi-r.1
for
107943230
ghi-r.1
for
107911521
bna-r.1
for
106450940
bna-r.1
for
106388710
cit-r.1
for
102624946
cit-r.1
for
127900642
sly-u.5
for
101255922
nta-r.1
for
107811117
nta-r.1
for
107760675
osa-u.5
for
4336643
osa-u.5
for
4349314
zma-u.5
for
100191669
zma-u.5
for
103633172
zma-u.5
for
100382507
hvu-r.1
for
123427527
sbi-r.1
for
8064641
bdi-r.1
for
100826205
bdi-r.1
for
100837707
bdi-r.1
for
100843835


Ortholog ID: 2894
Species gma gma mtr mtr ppo ath ath ath bra bra ghi ghi ghi bna bna cit cit sly nta nta osa osa zma zma zma hvu sbi bdi bdi bdi
Symbol LOC100811579 LOC100785956 LOC11436941 LOC25500877 LOC18096355 ROPGEF4 ROPGEF3 ROPGEF2 LOC103858869 LOC103866931 LOC107923776 LOC107943230 LOC107911521 LOC106450874 LOC106434945 LOC102624946 LOC127900642 LOC101255922 LOC107811117 LOC107760675 LOC4336643 LOC4349314 LOC100191669 LOC103633172 LOC100382507 LOC123427527 LOC8064641 LOC100826205 LOC100837707 LOC100843835
Function* rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 RHO guanyl-nucleotide exchange factor 4 RHO guanyl-nucleotide exchange factor 3 RHO guanyl-nucleotide exchange factor 2 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 4 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 4 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3-like rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3-like rop guanine nucleotide exchange factor 2 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 pollen-specific kinase partner protein rop guanine nucleotide exchange factor 3 Rop guanine nucleotide exchange factor 2 rop guanine nucleotide exchange factor 3-like rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3 rop guanine nucleotide exchange factor 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo04814 Motor proteins 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04620 Toll-like receptor signaling pathway 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 4
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04620 Toll-like receptor signaling pathway 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 8
zma01250 Biosynthesis of nucleotide sugars 8
zma00052 Galactose metabolism 7
zma00500 Starch and sucrose metabolism 7
zma00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100811579 100785956 11436941 25500877 18096355 819197 827967 839250 103858869 103866931 107923776 107943230 107911521 106450874 106434945 102624946 127900642 101255922 107811117 107760675 4336643 4349314 100191669 103633172 100382507 123427527 8064641 100826205 100837707 100843835
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