ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100812303	rho GDP-dissociation inhibitor 1
gma-r.7	100812303	rho GDP-dissociation inhibitor 1
gma-u.5	100813326	rho GDP-dissociation inhibitor 1
gma-u.5	100806852	rho GDP-dissociation inhibitor 1
gma-u.5	100780525	rho GDP-dissociation inhibitor 1
mtr-u.5	11444186	rho GDP-dissociation inhibitor 1
mtr-u.5	11411050	rho GDP-dissociation inhibitor 1
mtr-u.5	11439048	rho GDP-dissociation inhibitor 1
ppo-u.5	7488584	rho GDP-dissociation inhibitor 1
ppo-u.5	7463670	rho GDP-dissociation inhibitor 1
ath-u.5	SCN1	Immunoglobulin E-set superfamily protein
bra-r.6	103859248	rho GDP-dissociation inhibitor 1
vvi-u.5	100244819	rho GDP-dissociation inhibitor 1
vvi-u.5	100260088	rho GDP-dissociation inhibitor 1
vvi-u.5	100262024	rho GDP-dissociation inhibitor 1
ghi-r.1	107905683	rho GDP-dissociation inhibitor 1
ghi-r.1	107907411	rho GDP-dissociation inhibitor 1
bna-r.1	106427975	rho GDP-dissociation inhibitor 1
bna-r.1	106439161	rho GDP-dissociation inhibitor 1-like
cit-r.1	102620968	rho GDP-dissociation inhibitor 1
cit-r.1	102627893	rho GDP-dissociation inhibitor 1
sly-u.5	101249460	rho GDP-dissociation inhibitor 1
sly-u.5	101261404	rho GDP-dissociation inhibitor 1
sly-u.5	101256241	rho GDP-dissociation inhibitor 1
sot-r.1	102585476	rho GDP-dissociation inhibitor 1-like
sot-r.1	102592782	rho GDP-dissociation inhibitor 1-like
sot-r.1	102596240	rho GDP-dissociation inhibitor 1-like
nta-r.1	107771039	rho GDP-dissociation inhibitor 1-like
nta-r.1	107777713	rho GDP-dissociation inhibitor 1-like
nta-r.1	107792507	rho GDP-dissociation inhibitor 1
osa-u.5	4330540	rho GDP-dissociation inhibitor 1
osa-u.5	4340881	rho GDP-dissociation inhibitor 1
zma-u.5	103654010	rho GDP-dissociation inhibitor 1
zma-u.5	100283410	rho GDP-dissociation inhibitor 1
zma-u.5	100191557	uncharacterized LOC100191557
tae-r.2	123080242	rho GDP-dissociation inhibitor 1
tae-r.2	123063034	rho GDP-dissociation inhibitor 1
tae-r.2	123071927	rho GDP-dissociation inhibitor 1
sbi-r.1	8072859	rho GDP-dissociation inhibitor 1
sbi-r.1	8071775	rho GDP-dissociation inhibitor 1
bdi-r.1	100835327	rho GDP-dissociation inhibitor 1
bdi-r.1	100845405	rho GDP-dissociation inhibitor 1
bdi-r.1	100834696	rho GDP-dissociation inhibitor 1

Top 50 coexpressed genes to 100812303 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100812303 (gma-u.5 coexpression data)

CoexMap"100812303"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007266 [list] [network] Rho protein signal transduction

(13 genes)

IEA

GO CC

GO:0005829 [list] [network] cytosol	(1702 genes)	IEA
GO:0016020 [list] [network] membrane	(5894 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(9233 genes)	IEA

GO MF

GO:0005094 [list] [network] Rho GDP-dissociation inhibitor activity	(13 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_014617310.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, mito 1, extr 1, pero 1

(predict for XP_014617310.1)

Subcellular
localization
TargetP

other 9

(predict for XP_014617310.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100812303	gma-r.7 for 100812303	gma-u.5 for 100813326	gma-u.5 for 100806852	gma-u.5 for 100780525	mtr-u.5 for 11444186	mtr-u.5 for 11411050	mtr-u.5 for 11439048	ppo-u.5 for 7488584	ppo-u.5 for 7463670	ath-u.5 for SCN1	bra-r.6 for 103859248	vvi-u.5 for 100244819	vvi-u.5 for 100260088	vvi-u.5 for 100262024	ghi-r.1 for 107905683	ghi-r.1 for 107907411	bna-r.1 for 106427975	bna-r.1 for 106439161	cit-r.1 for 102620968	cit-r.1 for 102627893	sly-u.5 for 101249460	sly-u.5 for 101261404	sly-u.5 for 101256241	sot-r.1 for 102585476	sot-r.1 for 102592782	sot-r.1 for 102596240	nta-r.1 for 107771039	nta-r.1 for 107777713	nta-r.1 for 107792507	osa-u.5 for 4330540	osa-u.5 for 4340881	zma-u.5 for 103654010	zma-u.5 for 100283410	zma-u.5 for 100191557	tae-r.2 for 123080242	tae-r.2 for 123063034	tae-r.2 for 123071927	sbi-r.1 for 8072859	sbi-r.1 for 8071775	bdi-r.1 for 100835327	bdi-r.1 for 100845405	bdi-r.1 for 100834696

Ortholog

Ortholog ID: 1015

Species

gma

mtr

ppo

ath

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

sbi

bdi

Symbol

SCN1

Function^*