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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100812697   homeobox-DDT domain protein RLT1 
 gma-r.7   100812697   homeobox-DDT domain protein RLT1 
 gma-u.5   102660317   uncharacterized LOC102660317 
 gma-u.5   100811885   uncharacterized LOC100811885 
 gma-u.5   100805913   uncharacterized LOC100805913 
 mtr-u.5   11432917   homeobox-DDT domain protein RLT2 
 mtr-u.5   25488906   homeobox-DDT domain protein RLT1 
 ppo-u.5   7496774   homeobox-DDT domain protein RLT1 
 ppo-u.5   7475016   uncharacterized LOC7475016 
 ath-u.5   AT4G03250   Homeodomain-like superfamily protein 
 vvi-u.5   100265339   uncharacterized LOC100265339 
 sly-u.5   101265304   uncharacterized LOC101265304 
 sly-u.5   101256269   homeobox-DDT domain protein RLT1-like 

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Top 50 coexpressed genes to 100812697 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100812697 (gma-u.5 coexpression data)

CoexMap"100812697"


gmaLOC100812697 | Entrez gene ID : 100812697      
Species gma mtr ppo ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 5 2 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_006602294.1 [sequence] [blastp]
XP_014626641.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006602294.1)
nucl 9  (predict for XP_014626641.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006602294.1)
other 9  (predict for XP_014626641.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100812697

.
gma-r.7
for
100812697

.
gma-u.5
for
102660317

.
gma-u.5
for
100811885

.
gma-u.5
for
100805913

.
mtr-u.5
for
11432917

.
mtr-u.5
for
25488906

.
ppo-u.5
for
7496774

.
ppo-u.5
for
7475016

.
ath-u.5
for
AT4G03250

.
vvi-u.5
for
100265339

.
sly-u.5
for
101265304

.
sly-u.5
for
101256269

.


Ortholog ID: 7664
Species ath gma gma sly sly bra vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit nta nta
Symbol AT4G03250 LOC100805913 LOC100811885 LOC101256269 LOC101265304 LOC103846745 LOC100265339 LOC7496774 LOC7475016 LOC25488906 LOC11432917 LOC107944727 LOC107953181 LOC106389957 LOC106392300 LOC102600158 LOC102578174 LOC102611835 LOC107796248 LOC107768919
Function* Homeodomain-like superfamily protein uncharacterized LOC100805913 uncharacterized LOC100811885 homeobox-DDT domain protein RLT1-like uncharacterized LOC101265304 uncharacterized LOC103846745 uncharacterized LOC100265339 homeobox-DDT domain protein RLT1 uncharacterized LOC7475016 homeobox-DDT domain protein RLT1 homeobox-DDT domain protein RLT2 homeobox-DDT domain protein RLT3 uncharacterized LOC107953181 uncharacterized LOC106389957 uncharacterized LOC106392300 uncharacterized LOC102600158 uncharacterized LOC102578174 uncharacterized LOC102611835 uncharacterized LOC107796248 uncharacterized LOC107768919
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03013 Nucleocytoplasmic transport 2
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 3
ghi04382 Cornified envelope formation 3
ghi04144 Endocytosis 2
ghi03060 Protein export 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta04141 Protein processing in endoplasmic reticulum 4
nta03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827999 100805913 100811885 101256269 101265304 103846745 100265339 7496774 7475016 25488906 11432917 107944727 107953181 106389957 106392300 102600158 102578174 102611835 107796248 107768919
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