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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100813450   bifunctional TH2 protein, mitochondrial 
 gma-r.7   100813450   bifunctional TH2 protein, mitochondrial 
 gma-u.5   100788250   bifunctional TH2 protein, mitochondrial 
 mtr-u.5   11405594   bifunctional TH2 protein, mitochondrial 
 ppo-u.5   18104096   bifunctional TH2 protein, mitochondrial 
 ppo-u.5   7487204   bifunctional TH2 protein, mitochondrial 
 ath-u.5   AT5G32470   heme oxygenase-like, multi-helical 
 bra-r.6   103833758   bifunctional TH2 protein, mitochondrial 
 vvi-u.5   100266835   bifunctional TH2 protein, mitochondrial 
 vvi-u.5   100249779   bifunctional TH2 protein, mitochondrial 
 ghi-r.1   107899178   bifunctional TH2 protein, mitochondrial 
 ghi-r.1   121232330   bifunctional TH2 protein, mitochondrial 
 ghi-r.1   121209858   bifunctional TH2 protein, mitochondrial 
 bna-r.1   106390919   bifunctional TH2 protein, mitochondrial 
 bna-r.1   106412780   bifunctional TH2 protein, mitochondrial 
 cit-r.1   102608151   bifunctional TH2 protein, mitochondrial 
 cit-r.1   102611688   bifunctional TH2 protein, mitochondrial 
 sly-u.5   101248767   bifunctional TH2 protein, mitochondrial 
 sly-u.5   101246176   bifunctional TH2 protein, mitochondrial-like 
 sot-r.1   102586310   probable aminopyrimidine aminohydrolase, mitochondrial 
 sot-r.1   102605470   probable aminopyrimidine aminohydrolase, mitochondrial 
 nta-r.1   107819674   bifunctional TH2 protein, mitochondrial 
 nta-r.1   107760555   bifunctional TH2 protein, mitochondrial-like 
 nta-r.1   107768004   bifunctional TH2 protein, mitochondrial 
 osa-u.5   4346355   bifunctional TH2 protein, mitochondrial 
 zma-u.5   103653246   thiaminase1 
 zma-u.5   100275585   thiaminase2 
 tae-r.2   123164774   bifunctional TH2 protein, mitochondrial 
 tae-r.2   123156492   bifunctional TH2 protein, mitochondrial 
 tae-r.2   123154426   bifunctional TH2 protein, mitochondrial 
 hvu-r.1   123407340   bifunctional TH2 protein, mitochondrial 
 sbi-r.1   8054813   bifunctional TH2 protein, mitochondrial 
 bdi-r.1   100833398   bifunctional TH2 protein, mitochondrial 

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Top 50 coexpressed genes to 100813450 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100813450 (gma-u.5 coexpression data)

CoexMap"100813450"


gmaLOC100813450 | Entrez gene ID : 100813450      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 1 2 3 2 2 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00730 [list] [network] Thiamine metabolism (43 genes)
gmx01240 [list] [network] Biosynthesis of cofactors (475 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
Protein XP_006606472.1 [sequence] [blastp]
XP_014628388.1 [sequence] [blastp]
XP_040869359.1 [sequence] [blastp]
XP_040869360.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  cyto 1,  cysk 1  (predict for XP_006606472.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_014628388.1)
chlo 6,  mito 4  (predict for XP_040869359.1)
chlo 5,  mito 5,  chlo_mito 5  (predict for XP_040869360.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006606472.1)
mito 8,  chlo 5  (predict for XP_014628388.1)
mito 8,  chlo 5  (predict for XP_040869359.1)
mito 8,  chlo 5  (predict for XP_040869360.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100813450
gma-r.7
for
100813450
gma-u.5
for
100788250
mtr-u.5
for
11405594
ppo-u.5
for
18104096
ppo-u.5
for
7487204
ath-u.5
for
AT5G32470
bra-r.6
for
103833758
vvi-u.5
for
100266835
vvi-u.5
for
100249779
ghi-r.1
for
107899178
ghi-r.1
for
121232330
ghi-r.1
for
121209858
bna-r.1
for
106390919
bna-r.1
for
106412780
cit-r.1
for
102608151
cit-r.1
for
102611688
sly-u.5
for
101248767
sly-u.5
for
101246176
sot-r.1
for
102586310
sot-r.1
for
102605470
nta-r.1
for
107819674
nta-r.1
for
107760555
nta-r.1
for
107768004
osa-u.5
for
4346355
zma-u.5
for
103653246
zma-u.5
for
100275585
tae-r.2
for
123164774
tae-r.2
for
123156492
tae-r.2
for
123154426
hvu-r.1
for
123407340
sbi-r.1
for
8054813
bdi-r.1
for
100833398


Ortholog ID: 5379
Species gma gma mtr ppo ppo ath bra vvi vvi ghi ghi ghi bna bna cit cit sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100813450 LOC100788250 LOC11405594 LOC18104096 LOC7487204 AT5G32470 LOC103833758 LOC100266835 LOC100249779 LOC107899178 LOC121209858 LOC107958274 LOC106390919 LOC106412780 LOC102608151 LOC102611688 LOC101248767 LOC101246176 LOC102586310 LOC102605470 LOC107819674 LOC107760555 LOC107797028 LOC4346355 LOC103653246 LOC100275585 LOC123164774 LOC123156492 LOC123154426 LOC123407340 LOC8054813 LOC100833398
Function* bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial heme oxygenase-like, multi-helical bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial-like probable aminopyrimidine aminohydrolase, mitochondrial probable aminopyrimidine aminohydrolase, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial-like bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial thiaminase1 thiaminase2 bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial bifunctional TH2 protein, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 4
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03020 RNA polymerase 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03420 Nucleotide excision repair 3
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03015 mRNA surveillance pathway 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00730 Thiamine metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00410 beta-Alanine metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
bna00330 Arginine and proline metabolism 2
bna00410 beta-Alanine metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 12
nta04075 Plant hormone signal transduction 10
nta00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma00730 Thiamine metabolism 2
zma01240 Biosynthesis of cofactors 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00730 Thiamine metabolism 2
zma01240 Biosynthesis of cofactors 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04120 Ubiquitin mediated proteolysis 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 7
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 7
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100813450 100788250 11405594 18104096 7487204 833206 103833758 100266835 100249779 107899178 121209858 107958274 106390919 106412780 102608151 102611688 101248767 101246176 102586310 102605470 107819674 107760555 107797028 4346355 103653246 100275585 123164774 123156492 123154426 123407340 8054813 100833398
The preparation time of this page was 3.1 [sec].