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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100813518   60S ribosomal protein L2, mitochondrial 
 gma-r.7   100813518   60S ribosomal protein L2, mitochondrial 
 gma-u.5   100527336   putative 60S ribosomal protein L2 
 mtr-u.5   25497414   60S ribosomal protein L2, mitochondrial 
 ath-u.5   AT2G07715   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   rpl2   ribosomal protein L2 
 bra-r.6   103833201   60S ribosomal protein L2, mitochondrial 
 vvi-u.5   rpl2   ribosomal protein L2 
 ghi-r.1   rpl2   ribosomal protein L2 
 bna-r.1   111205203   60S ribosomal protein L2, mitochondrial 
 bna-r.1   rpl2   ribosomal protein L2 
 cit-r.1   102625342   60S ribosomal protein L2, mitochondrial 
 sly-u.5   rpl2   ribosomal protein L2 
 sly-u.5   rpl2   ribosomal protein L2 
 nta-r.1   orf315   hypothetical protein 
 nta-r.1   rpl2   ribosomal protein L2 

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Top 50 coexpressed genes to 100813518 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100813518 (gma-u.5 coexpression data)

CoexMap"100813518"


gmaLOC100813518 | Entrez gene ID : 100813518      
Species gma mtr ath bra vvi ghi bna cit sly nta sot bdi osa tae ppo zma cre sbi hvu
Paralog 3 1 2 1 1 1 2 1 2 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032543 [list] [network] mitochondrial translation  (49 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (50 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003532340.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_003532340.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_003532340.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100813518
gma-r.7
for
100813518
gma-u.5
for
100527336
mtr-u.5
for
25497414
ath-u.5
for
AT2G07715
ath-u.5
for
rpl2
bra-r.6
for
103833201
vvi-u.5
for
rpl2
ghi-r.1
for
rpl2
bna-r.1
for
111205203
bna-r.1
for
rpl2
cit-r.1
for
102625342
sly-u.5
for
rpl2
sly-u.5
for
rpl2
nta-r.1
for
orf315
nta-r.1
for
rpl2


Ortholog ID: 12410
Species gma gma mtr ath ath bra vvi ghi bna bna cit sly sly nta nta
Symbol LOC100813518 LOC100527336 LOC25497414 AT2G07715 rpl2 LOC103833201 rpl2 rpl2 LOC111205203 rpl2 LOC102625342 rpl2 rpl2 orf315 rpl2
Function* 60S ribosomal protein L2, mitochondrial putative 60S ribosomal protein L2 60S ribosomal protein L2, mitochondrial Nucleic acid-binding, OB-fold-like protein ribosomal protein L2 60S ribosomal protein L2, mitochondrial ribosomal protein L2 ribosomal protein L2 60S ribosomal protein L2, mitochondrial ribosomal protein L2 60S ribosomal protein L2, mitochondrial ribosomal protein L2 ribosomal protein L2 hypothetical protein ribosomal protein L2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 4
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03010 Ribosome 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 11
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03013 Nucleocytoplasmic transport 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
nta03010 Ribosome 2
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 7
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100813518 100527336 25497414 815389 36335661 103833201 7498640 24679516 111205203 4237945 102625342 34678321 34678304 3205210 3205363
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