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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100815996   pumilio homolog 24 
 gma-r.7   100815996   pumilio homolog 24 
 gma-u.5   100780739   pumilio homolog 24 
 mtr-u.5   25494096   pumilio homolog 24 
 ppo-u.5   18101891   pumilio homolog 24 
 ppo-u.5   7496505   pumilio homolog 24 
 ath-u.5   PUM24   pumilio 24 
 bra-r.6   103869733   pumilio homolog 24 
 vvi-u.5   100255113   pumilio homolog 24 
 ghi-r.1   107888931   pumilio homolog 24 
 ghi-r.1   107891852   pumilio homolog 24 
 bna-r.1   125587096   pumilio homolog 24-like 
 bna-r.1   125594248   pumilio homolog 24-like 
 bna-r.1   106452073   pumilio homolog 24 
 cit-r.1   102625301   pumilio homolog 24 
 sly-u.5   101266558   pumilio homolog 24 
 sot-r.1   102600058   pumilio homolog 24 
 nta-r.1   107812851   pumilio homolog 24 
 nta-r.1   107780977   pumilio homolog 24 
 osa-u.5   4334667   pumilio homolog 24 
 zma-u.5   100191998   uncharacterized LOC100191998 
 tae-r.2   123087820   pumilio homolog 24 
 tae-r.2   123087819   pumilio homolog 24 
 hvu-r.1   123398978   pumilio homolog 24-like 
 hvu-r.1   123453164   pumilio homolog 24-like 
 hvu-r.1   123398977   pumilio homolog 24-like 
 sbi-r.1   8080200   pumilio homolog 24 
 bdi-r.1   100846788   pumilio homolog 24 
 cre-r.1   CHLRE_12g528950v5   uncharacterized protein 

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Top 50 coexpressed genes to 100815996 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100815996 (gma-u.5 coexpression data)

CoexMap"100815996"


gmaLOC100815996 | Entrez gene ID : 100815996      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 1 1 2 3 1 1 1 2 1 1 2 3 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006417 [list] [network] regulation of translation  (100 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003529548.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  plas 1,  vacu 1  (predict for XP_003529548.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003529548.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100815996
gma-r.7
for
100815996
gma-u.5
for
100780739
mtr-u.5
for
25494096
ppo-u.5
for
18101891
ppo-u.5
for
7496505
ath-u.5
for
PUM24
bra-r.6
for
103869733
vvi-u.5
for
100255113
ghi-r.1
for
107888931
ghi-r.1
for
107891852
bna-r.1
for
125587096
bna-r.1
for
125594248
bna-r.1
for
106452073
cit-r.1
for
102625301
sly-u.5
for
101266558
sot-r.1
for
102600058
nta-r.1
for
107812851
nta-r.1
for
107780977
osa-u.5
for
4334667
zma-u.5
for
100191998
tae-r.2
for
123087820
tae-r.2
for
123087819
hvu-r.1
for
123398978
hvu-r.1
for
123453164
hvu-r.1
for
123398977
sbi-r.1
for
8080200
bdi-r.1
for
100846788
cre-r.1
for
CHLRE_12g528950v5


Ortholog ID: 5740
Species gma gma mtr ppo ppo ath bra vvi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu hvu hvu sbi bdi cre
Symbol LOC100815996 LOC100780739 LOC25494096 LOC18101891 LOC7496505 PUM24 LOC103869733 LOC100255113 LOC107888931 LOC107891852 LOC125594248 LOC106452073 LOC106401633 LOC102625301 LOC101266558 LOC102600058 LOC107812851 LOC107780977 LOC4334667 LOC100191998 LOC123123595 LOC123114108 LOC123114109 LOC123398978 LOC123453164 LOC123398977 LOC8080200 LOC100846788 CHLRE_12g528950v5
Function* pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24-like pumilio homolog 24 pumilio homolog 24-like pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 uncharacterized LOC100191998 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24 pumilio homolog 24-like pumilio homolog 24-like pumilio homolog 24-like pumilio homolog 24 pumilio homolog 24 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03020 RNA polymerase 2
nta00040 Pentose and glucuronate interconversions 2
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00760 Nicotinate and nicotinamide metabolism 3
tae00270 Cysteine and methionine metabolism 2
tae00330 Arginine and proline metabolism 2
tae00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00760 Nicotinate and nicotinamide metabolism 3
tae03013 Nucleocytoplasmic transport 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100815996 100780739 25494096 18101891 7496505 820934 103869733 100255113 107888931 107891852 125594248 106452073 106401633 102625301 101266558 102600058 107812851 107780977 4334667 100191998 123123595 123114108 123114109 123398978 123453164 123398977 8080200 100846788 5722434
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