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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816819   KH domain-containing protein HEN4 
 gma-r.7   100816819   KH domain-containing protein HEN4 
 gma-u.5   100814554   KH domain-containing protein HEN4 
 gma-u.5   100786076   KH domain-containing protein HEN4 
 gma-u.5   100782496   KH domain-containing protein HEN4 
 mtr-u.5   11423591   KH domain-containing protein HEN4 
 mtr-u.5   11407739   KH domain-containing protein HEN4 
 ppo-u.5   7485028   KH domain-containing protein HEN4 
 ppo-u.5   7472523   KH domain-containing protein HEN4 
 ath-u.5   HEN4   RNA-binding KH domain-containing protein 
 bra-r.6   103873863   KH domain-containing protein HEN4 
 ghi-r.1   107919848   KH domain-containing protein HEN4 
 bna-r.1   125583562   KH domain-containing protein HEN4-like 
 bna-r.1   125610131   KH domain-containing protein HEN4-like 
 cit-r.1   102611119   KH domain-containing protein HEN4 
 sly-u.5   101245802   KH domain-containing protein HEN4 
 sot-r.1   102588041   KH domain-containing protein At4g18375 
 nta-r.1   107803127   KH domain-containing protein HEN4 
 nta-r.1   107827938   KH domain-containing protein HEN4 

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Top 50 coexpressed genes to 100816819 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816819 (gma-u.5 coexpression data)

CoexMap"100816819"


gmaLOC100816819 | Entrez gene ID : 100816819      
Species gma mtr ppo ath bra ghi bna cit sly sot nta vvi bdi osa tae zma cre sbi hvu
Paralog 5 2 2 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_006594665.1 [sequence] [blastp]
XP_006594666.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_006594665.1)
chlo 6,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_006594666.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006594665.1)
chlo 9  (predict for XP_006594666.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816819
gma-r.7
for
100816819
gma-u.5
for
100814554
gma-u.5
for
100786076
gma-u.5
for
100782496
mtr-u.5
for
11423591
mtr-u.5
for
11407739
ppo-u.5
for
7485028
ppo-u.5
for
7472523
ath-u.5
for
HEN4
bra-r.6
for
103873863
ghi-r.1
for
107919848
bna-r.1
for
125583562
bna-r.1
for
125610131
cit-r.1
for
102611119
sly-u.5
for
101245802
sot-r.1
for
102588041
nta-r.1
for
107803127
nta-r.1
for
107827938


Ortholog ID: 12687
Species gma gma gma mtr mtr ppo ppo ath bra ghi bna bna cit sly sot nta nta
Symbol LOC100816819 LOC100786076 LOC100782496 LOC11423591 LOC11407739 LOC7485028 LOC7472523 HEN4 LOC103873863 LOC107919848 LOC125583562 LOC125610131 LOC102611119 LOC101245802 LOC102588041 LOC107803127 LOC107827938
Function* KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4-like KH domain-containing protein HEN4-like KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein At4g18375 KH domain-containing protein HEN4 KH domain-containing protein HEN4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100816819 100786076 100782496 11423591 11407739 7485028 7472523 836560 103873863 107919848 125583562 125610131 102611119 101245802 102588041 107803127 107827938
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