ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100816827	protein trichome birefringence-like 38
gma-r.7	100816827	protein trichome birefringence-like 38
gma-u.5	100813837	protein trichome birefringence-like 39
mtr-u.5	11443462	protein trichome birefringence-like 38
mtr-u.5	25487772	protein trichome birefringence-like 39
mtr-u.5	25487208	protein trichome birefringence-like 42
ppo-u.5	7472315	protein trichome birefringence-like 38
ppo-u.5	7472331	protein trichome birefringence-like 41
ppo-u.5	7494599	protein trichome birefringence-like 39
ath-u.5	AT2G31110	trichome birefringence-like protein (DUF828)
ath-u.5	TBL37	TRICHOME BIREFRINGENCE-LIKE 37
bra-r.6	103828991	protein trichome birefringence-like 38
vvi-u.5	100267770	protein trichome birefringence-like 43
vvi-u.5	100258410	protein trichome birefringence-like 38
vvi-u.5	100253718	protein trichome birefringence-like 38
ghi-r.1	107892609	protein trichome birefringence-like 38
bna-r.1	111205257	protein trichome birefringence-like 37
cit-r.1	102617623	protein trichome birefringence-like 38
cit-r.1	102620241	protein trichome birefringence-like 43
sly-u.5	101259954	protein trichome birefringence-like 39
sot-r.1	102599991	protein trichome birefringence-like 38
sot-r.1	102598428	protein trichome birefringence-like 42
sot-r.1	102593572	protein trichome birefringence-like 38
nta-r.1	107806033	protein trichome birefringence-like 38
nta-r.1	107811314	protein trichome birefringence-like 39
osa-u.5	4325373	protein trichome birefringence-like 38
zma-u.5	103651417	uncharacterized LOC103651417
tae-r.2	123061617	protein trichome birefringence-like 38
tae-r.2	123078675	protein trichome birefringence-like 38
tae-r.2	123070237	protein trichome birefringence-like 38
hvu-r.1	123443990	protein trichome birefringence-like 38
sbi-r.1	8058251	protein trichome birefringence-like 38
bdi-r.1	100834496	protein trichome birefringence-like 38

Top 50 coexpressed genes to 100816827 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100816827 (gma-u.5 coexpression data)

CoexMap"100816827"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(934 genes)

IEA

GO MF

GO:0016413 [list] [network] O-acetyltransferase activity

(126 genes)

IEA

Protein

XP_003542986.1 [sequence] [blastp]
XP_006594557.1 [sequence] [blastp]
XP_014621277.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, cyto_mito 1	(predict for XP_003542986.1)
chlo 7, nucl 1, extr 1, E.R. 1, cyto_nucl 1, cysk_nucl 1, nucl_plas 1	(predict for XP_006594557.1)
chlo 6, nucl 1, extr 1	(predict for XP_014621277.1)

Subcellular
localization
TargetP

scret 6	(predict for XP_003542986.1)
scret 6	(predict for XP_006594557.1)
scret 9	(predict for XP_014621277.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100816827	gma-r.7 for 100816827	gma-u.5 for 100813837	mtr-u.5 for 11443462	mtr-u.5 for 25487772	mtr-u.5 for 25487208	ppo-u.5 for 7472315	ppo-u.5 for 7472331	ppo-u.5 for 7494599	ath-u.5 for AT2G31110	ath-u.5 for TBL37	bra-r.6 for 103828991	vvi-u.5 for 100267770	vvi-u.5 for 100258410	vvi-u.5 for 100253718	ghi-r.1 for 107892609	bna-r.1 for 111205257	cit-r.1 for 102617623	cit-r.1 for 102620241	sly-u.5 for 101259954	sot-r.1 for 102599991	sot-r.1 for 102598428	sot-r.1 for 102593572	nta-r.1 for 107806033	nta-r.1 for 107811314	osa-u.5 for 4325373	zma-u.5 for 103651417	tae-r.2 for 123061617	tae-r.2 for 123078675	tae-r.2 for 123070237	hvu-r.1 for 123443990	sbi-r.1 for 8058251	bdi-r.1 for 100834496

Ortholog

Ortholog ID: 446

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TBL37

TBL38

Function^*

protein trichome birefringence-like 39