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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100816889  uncharacterized RNA methyltransferase pc1998 
 gma-r.7  100816889  uncharacterized RNA methyltransferase pc1998 
 mtr-u.5  25497845  uncharacterized RNA methyltransferase pc1998 
 ppo-u.5  18095261  uncharacterized LOC18095261 
 ath-u.5  AT3G27180  S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6  103875244  uncharacterized RNA methyltransferase pc1998 
 vvi-u.5  100265277  uncharacterized LOC100265277 
 ghi-r.1  107896720  uncharacterized RNA methyltransferase pc1998 
 ghi-r.1  107914205  uncharacterized RNA methyltransferase pc1998 
 bna-r.1  106349281  uncharacterized RNA methyltransferase pc1998-like 
 bna-r.1  106376963  uncharacterized RNA methyltransferase pc1998 
 cit-r.1  102628392  uncharacterized LOC102628392 
 sly-u.5  101250276  uncharacterized LOC101250276 
 sot-r.1  102586075  uncharacterized RNA methyltransferase pc1998 
 nta-r.1  107825244  uncharacterized LOC107825244 
 nta-r.1  107789949  uncharacterized LOC107789949 
 osa-u.5  4327742  uncharacterized LOC4327742 
 zma-u.5  100276021  uncharacterized LOC100276021 
 tae-r.2  123063105  uncharacterized RNA methyltransferase pc1998 
 tae-r.2  123072012  uncharacterized RNA methyltransferase pc1998 
 tae-r.2  123080300  uncharacterized RNA methyltransferase pc1998 
 hvu-r.1  123445233  uncharacterized RNA methyltransferase pc1998 
 sbi-r.1  8059367  uncharacterized RNA methyltransferase pc1998 
 bdi-r.1  100821483  uncharacterized RNA methyltransferase pc1998 
 cre-r.1  CHLRE_13g578012v5  uncharacterized protein 
 cre-r.1  CHLRE_13g578201v5  uncharacterized protein 

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Top 50 coexpressed genes to 100816889 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816889 (gma-u.5 coexpression data)

CoexMap"100816889"


gmaLOC100816889 | Entrez gene ID : 100816889
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (1008 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (89 genes)  IEA  
Protein XP_006599034.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for XP_006599034.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_006599034.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100816889


gma-r.7
for
100816889


mtr-u.5
for
25497845


ppo-u.5
for
18095261


ath-u.5
for
AT3G27180


bra-r.6
for
103875244


vvi-u.5
for
100265277


ghi-r.1
for
107896720


ghi-r.1
for
107914205


bna-r.1
for
106349281


bna-r.1
for
106376963


cit-r.1
for
102628392


sly-u.5
for
101250276


sot-r.1
for
102586075


nta-r.1
for
107825244


nta-r.1
for
107789949


osa-u.5
for
4327742


zma-u.5
for
100276021


tae-r.2
for
123063105


tae-r.2
for
123072012


tae-r.2
for
123080300


hvu-r.1
for
123445233


sbi-r.1
for
8059367


bdi-r.1
for
100821483


cre-r.1
for
CHLRE_13g578012v5


cre-r.1
for
CHLRE_13g578201v5



Ortholog ID: 10119
Species gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre cre
Symbol LOC100816889 LOC25497845 LOC18095261 AT3G27180 LOC103875244 LOC100265277 LOC107896720 LOC107914205 LOC106349281 LOC106376963 LOC102628392 LOC101250276 LOC102586075 LOC107825244 LOC107789949 LOC4327742 LOC100276021 LOC123063105 LOC123072012 LOC123080300 LOC123445233 LOC8059367 LOC100821483 CHLRE_13g578012v5 CHLRE_13g578201v5
Function* uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized LOC18095261 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein uncharacterized RNA methyltransferase pc1998 uncharacterized LOC100265277 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998-like uncharacterized RNA methyltransferase pc1998 uncharacterized LOC102628392 uncharacterized LOC101250276 uncharacterized RNA methyltransferase pc1998 uncharacterized LOC107825244 uncharacterized LOC107789949 uncharacterized LOC4327742 uncharacterized LOC100276021 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized RNA methyltransferase pc1998 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra00261 Monobactam biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
bra00300 Lysine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 5
sly01240 Biosynthesis of cofactors 3
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100816889 25497845 18095261 822337 103875244 100265277 107896720 107914205 106349281 106376963 102628392 101250276 102586075 107825244 107789949 4327742 100276021 123063105 123072012 123080300 123445233 8059367 100821483 5722656 66055979
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