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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100818300   glycine-rich RNA-binding protein 4, mitochondrial 
 gma-r.7   100818300   glycine-rich RNA-binding protein 4, mitochondrial 
 gma-u.5   100799124   heterogeneous nuclear ribonucleoprotein D-like 
 gma-u.5   112998378   glycine-rich RNA-binding protein GRP1A-like 
 mtr-u.5   11413936   glycine-rich RNA-binding protein GRP1A 
 mtr-u.5   11428326   glycine-rich RNA-binding protein 3, mitochondrial 
 ppo-u.5   7487102   glycine-rich RNA-binding protein 4, mitochondrial 
 ppo-u.5   18102138   glycine-rich RNA-binding protein 7 
 ath-u.5   CCR1   cold, circadian rhythm, and RNA binding 1 
 ath-u.5   AT1G73530   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   GR-RBP3   glycine-rich RNA-binding protein 3 
 bra-r.6   103860567   glycine-rich RNA-binding protein 3, mitochondrial 
 bra-r.6   103852896   glycine-rich RNA-binding protein 5, mitochondrial 
 bra-r.6   103842502   glycine-rich RNA-binding protein GRP1A 
 vvi-u.5   100854881   small RNA-binding protein 11, chloroplastic 
 vvi-u.5   100853676   glycine-rich RNA-binding protein GRP2A 
 vvi-u.5   100263981   small RNA-binding protein 11, chloroplastic 
 ghi-r.1   107929711   small RNA-binding protein 11, chloroplastic 
 ghi-r.1   107928749   glycine-rich RNA-binding protein GRP1A 
 ghi-r.1   107928000   glycine-rich RNA-binding protein GRP2A 
 bna-r.1   125605193   glycine-rich RNA-binding protein 2, mitochondrial-like 
 bna-r.1   106381370   glycine-rich RNA-binding protein 5, mitochondrial-like 
 bna-r.1   106381665   organelle RRM domain-containing protein 6, chloroplastic-like 
 cit-r.1   102625620   glycine-rich RNA-binding protein 2, mitochondrial 
 cit-r.1   102623019   glycine-rich RNA-binding protein 2, mitochondrial 
 cit-r.1   102620823   small RNA-binding protein 11, chloroplastic-like 
 sly-u.5   101260667   organelle RRM domain-containing protein 6, chloroplastic 
 sly-u.5   101262262   glycine-rich RNA-binding protein 
 sly-u.5   GRP1   glycine-rich RNA-binding protein-like 
 sot-r.1   102600363   glycine-rich RNA-binding protein-like 
 sot-r.1   102605902   glycine-rich RNA-binding protein 3, mitochondrial 
 nta-r.1   107827182   small RNA-binding protein 11, chloroplastic 
 nta-r.1   107800467   glycine-rich RNA-binding protein 2, mitochondrial-like 
 nta-r.1   107797091   uncharacterized LOC107797091 
 osa-u.5   4343831   glycine-rich RNA-binding protein 2, mitochondrial 
 osa-u.5   9269592   organelle RRM domain-containing protein 6, chloroplastic 
 osa-u.5   9269210   glycine-rich RNA-binding protein 4, mitochondrial 
 zma-u.5   100194217   responsive to abscisic acid15 
 zma-u.5   100191295   Glycine-rich RNA-binding protein 3 mitochondrial 
 zma-u.5   100191146   uncharacterized LOC100191146 
 tae-r.2   123071960   glycine-rich RNA-binding protein 2, mitochondrial 
 tae-r.2   123080303   glycine-rich RNA-binding protein 2, mitochondrial 
 tae-r.2   123080264   glycine-rich RNA-binding protein 2, mitochondrial 
 hvu-r.1   123448995   organelle RRM domain-containing protein 6, chloroplastic-like 
 hvu-r.1   123447032   glycine-rich RNA-binding protein blt801 
 hvu-r.1   123452897   glycine-rich RNA-binding protein 2, mitochondrial-like 
 sbi-r.1   8079176   glycine-rich RNA-binding protein 4, mitochondrial 
 sbi-r.1   8060654   glycine-rich RNA-binding protein 8 
 sbi-r.1   8078726   glycine-rich RNA-binding protein 2, mitochondrial 
 bdi-r.1   100823193   glycine-rich RNA-binding protein 2, mitochondrial 
 bdi-r.1   100825748   glycine-rich RNA-binding protein 1 
 cre-r.1   CHLRE_01g032300v5   uncharacterized protein 
 cre-r.1   CHLRE_17g729150v5   uncharacterized protein 
 cre-r.1   CHLRE_09g392350v5   uncharacterized protein 

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Top 50 coexpressed genes to 100818300 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100818300 (gma-u.5 coexpression data)

CoexMap"100818300"


gmaLOC100818300 | Entrez gene ID : 100818300      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 3 3 3 3 3 3 2 3 3 3 3 3 3 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO:0080156 [list] [network] mitochondrial mRNA modification  (23 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1058 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_014634713.1 [sequence] [blastp]
XP_014634714.1 [sequence] [blastp]
XP_014634715.1 [sequence] [blastp]
XP_040874327.1 [sequence] [blastp]
XP_040874328.1 [sequence] [blastp]
XP_040874329.1 [sequence] [blastp]
XP_040874330.1 [sequence] [blastp]
XP_040874331.1 [sequence] [blastp]
XP_040874332.1 [sequence] [blastp]
XP_040874333.1 [sequence] [blastp]
XP_040874334.1 [sequence] [blastp]
XP_040874335.1 [sequence] [blastp]
XP_040874336.1 [sequence] [blastp]
XP_040874337.1 [sequence] [blastp]
XP_040874338.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 3  (predict for XP_014634713.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_014634714.1)
nucl 4,  chlo 2,  cyto 2,  mito 2,  chlo_mito 2  (predict for XP_014634715.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874327.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874328.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874329.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874330.1)
nucl 4,  chlo 2,  cyto 2,  mito 2,  chlo_mito 2  (predict for XP_040874331.1)
nucl 4,  chlo 2,  cyto 2,  mito 2,  chlo_mito 2  (predict for XP_040874332.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874333.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874334.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874335.1)
chlo 4,  nucl 3,  mito 3  (predict for XP_040874336.1)
nucl 4,  chlo 2,  cyto 2,  mito 2,  chlo_mito 2  (predict for XP_040874337.1)
chlo 5,  mito 3,  nucl 2  (predict for XP_040874338.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_014634713.1)
chlo 4  (predict for XP_014634714.1)
chlo 2  (predict for XP_014634715.1)
chlo 4  (predict for XP_040874327.1)
chlo 4  (predict for XP_040874328.1)
chlo 4  (predict for XP_040874329.1)
chlo 4  (predict for XP_040874330.1)
chlo 2  (predict for XP_040874331.1)
chlo 2  (predict for XP_040874332.1)
chlo 4  (predict for XP_040874333.1)
chlo 4  (predict for XP_040874334.1)
chlo 4  (predict for XP_040874335.1)
chlo 4  (predict for XP_040874336.1)
chlo 2  (predict for XP_040874337.1)
chlo 4  (predict for XP_040874338.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100818300
gma-r.7
for
100818300
gma-u.5
for
100799124
gma-u.5
for
112998378
mtr-u.5
for
11413936
mtr-u.5
for
11428326
ppo-u.5
for
7487102
ppo-u.5
for
18102138
ath-u.5
for
CCR1
ath-u.5
for
AT1G73530
ath-u.5
for
GR-RBP3
bra-r.6
for
103860567
bra-r.6
for
103852896
bra-r.6
for
103842502
vvi-u.5
for
100854881
vvi-u.5
for
100853676
vvi-u.5
for
100263981
ghi-r.1
for
107929711
ghi-r.1
for
107928749
ghi-r.1
for
107928000
bna-r.1
for
125605193
bna-r.1
for
106381370
bna-r.1
for
106381665
cit-r.1
for
102625620
cit-r.1
for
102623019
cit-r.1
for
102620823
sly-u.5
for
101260667
sly-u.5
for
101262262
sly-u.5
for
GRP1
sot-r.1
for
102600363
sot-r.1
for
102605902
nta-r.1
for
107827182
nta-r.1
for
107800467
nta-r.1
for
107797091
osa-u.5
for
4343831
osa-u.5
for
9269592
osa-u.5
for
9269210
zma-u.5
for
100194217
zma-u.5
for
100191295
zma-u.5
for
100191146
tae-r.2
for
123071960
tae-r.2
for
123080303
tae-r.2
for
123080264
hvu-r.1
for
123448995
hvu-r.1
for
123447032
hvu-r.1
for
123452897
sbi-r.1
for
8079176
sbi-r.1
for
8060654
sbi-r.1
for
8078726
bdi-r.1
for
100823193
bdi-r.1
for
100825748
cre-r.1
for
CHLRE_01g032300v5
cre-r.1
for
CHLRE_17g729150v5
cre-r.1
for
CHLRE_09g392350v5


Ortholog ID: 75
Species gma gma gma mtr mtr mtr ppo ppo ppo ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre cre cre
Symbol LOC100796704 LOC100305467 LOC100777821 LOC11436305 LOC25497346 LOC25499413 LOC7485722 LOC18109442 LOC7485193 AT5G06210 AT3G08000 LOC103835157 LOC103852851 LOC103851541 LOC100854881 LOC100263981 LOC100246039 LOC107896330 LOC107960836 LOC107952135 LOC106365965 LOC106439949 LOC102623019 LOC102608923 LOC102627364 LOC101257264 LOC101254436 LOC101245474 LOC102581514 LOC102587142 LOC102587662 LOC107787039 LOC107759364 LOC142161681 LOC4343831 LOC4352279 LOC9266763 LOC100191295 LOC100284207 LOC542725 LOC123072018 LOC123134221 LOC123097872 LOC123425384 LOC123400027 LOC123403078 LOC8079176 LOC8075292 LOC110434104 LOC100840808 LOC100842305 CHLRE_01g032300v5 CHLRE_09g392350v5 CHLRE_02g079400v5
Function* RNA recognition motif-containing protein putative glycine-rich RNA binding protein glycine-rich RNA-binding protein 2 glycine-rich RNA-binding protein 2, mitochondrial organelle RRM domain-containing protein 6, chloroplastic small RNA-binding protein 11, chloroplastic small RNA-binding protein 11, chloroplastic small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 6, chloroplastic RNA binding (RRM/RBD/RNP motifs) family protein RNA-binding (RRM/RBD/RNP motifs) family protein glycine-rich RNA-binding protein 10 organelle RRM domain-containing protein 6, chloroplastic cold-inducible RNA-binding protein small RNA-binding protein 11, chloroplastic small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 6, chloroplastic small RNA-binding protein 11, chloroplastic small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein GRP1A glycine-rich RNA-binding protein GRP1A glycine-rich RNA-binding protein 3, mitochondrial glycine-rich RNA-binding protein 2, mitochondrial small RNA-binding protein 11, chloroplastic organelle RRM domain-containing protein 2, mitochondrial-like glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein glycine-rich RNA-binding protein 2, mitochondrial-like glycine-rich RNA-binding protein 3, mitochondrial-like glycine-rich RNA-binding protein 2, mitochondrial-like glycine-rich RNA-binding protein-like glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein blt801 small RNA-binding protein 11, chloroplastic Glycine-rich RNA-binding protein 3 mitochondrial glycine-rich RNA-binding protein 7 uncharacterized LOC542725 glycine-rich RNA-binding protein 2, mitochondrial glycine-rich RNA-binding protein organelle RRM domain-containing protein 6, chloroplastic loricrin-like glycine-rich RNA-binding protein blt801-like glycine-rich RNA-binding protein-like glycine-rich RNA-binding protein 4, mitochondrial small RNA-binding protein 11, chloroplastic glycine-rich RNA-binding protein 4, mitochondrial-like glycine-rich RNA-binding protein 4, mitochondrial glycine-rich RNA-binding protein blt801 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 3
mtr03420 Nucleotide excision repair 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03040 Spliceosome 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
ghi00940 Phenylpropanoid biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04626 Plant-pathogen interaction 4
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03008 Ribosome biogenesis in eukaryotes 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta03008 Ribosome biogenesis in eukaryotes 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03010 Ribosome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03420 Nucleotide excision repair 5
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 4
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04145 Phagosome 3
sbi04517 IgSF CAM signaling 3
sbi04814 Motor proteins 3
sbi00520 Amino sugar and nucleotide sugar metabolism 2
sbi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100796704 100305467 100777821 11436305 25497346 25499413 7485722 18109442 7485193 830508 819991 103835157 103852851 103851541 100854881 100263981 100246039 107896330 107960836 107952135 106365965 106439949 102623019 102608923 102627364 101257264 101254436 101245474 102581514 102587142 102587662 107787039 107759364 142161681 4343831 4352279 9266763 100191295 100284207 542725 123072018 123134221 123097872 123425384 123400027 123403078 8079176 8075292 110434104 100840808 100842305 5715399 5720095 5727272
The preparation time of this page was 2.1 [sec].