ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100818456	protein SMAX1-LIKE 6
gma-r.7	100818456	protein SMAX1-LIKE 6
gma-u.5	100786125	protein SMAX1-LIKE 8
gma-u.5	100776148	protein SMAX1-LIKE 6
gma-u.5	100804458	protein SMAX1-LIKE 6
mtr-u.5	25490895	protein SMAX1-LIKE 7
mtr-u.5	11410353	protein SMAX1-LIKE 8
mtr-u.5	11407081	protein SMAX1-LIKE 6
ppo-u.5	7478524	protein SMAX1-LIKE 6
ppo-u.5	7494498	protein SMAX1-LIKE 8
ppo-u.5	7474431	protein SMAX1-LIKE 8
ath-u.5	AT2G29970	Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT2G40130	Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT1G07200	Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
bra-r.6	103866977	protein SMAX1-LIKE 8
bra-r.6	103867997	protein SMAX1-LIKE 7
bra-r.6	103843477	protein SMAX1-LIKE 6
vvi-u.5	100241532	protein SMAX1-LIKE 6
vvi-u.5	100260392	protein SMAX1-LIKE 6
ghi-r.1	107906628	protein SMAX1-LIKE 6
ghi-r.1	107931843	protein SMAX1-LIKE 6
ghi-r.1	107959196	protein SMAX1-LIKE 6
bna-r.1	125578629	protein SMAX1-LIKE 6-like
bna-r.1	106398255	protein SMAX1-LIKE 6
bna-r.1	106377254	protein SMAX1-LIKE 7
cit-r.1	102628359	protein SMAX1-LIKE 8
cit-r.1	102625296	protein SMAX1-LIKE 7
sly-u.5	101252191	protein SMAX1-LIKE 8-like
sly-u.5	101247060	SMAX1-LIKE protein
sot-r.1	102599854	uncharacterized LOC102599854
sot-r.1	102606448	uncharacterized LOC102606448
nta-r.1	107820835	protein SMAX1-LIKE 6
nta-r.1	107803297	protein SMAX1-LIKE 6
nta-r.1	107780452	protein SMAX1-LIKE 6-like
osa-u.5	4349543	Protein DWARF 53
osa-u.5	4351252	protein DWARF 53-LIKE-like
zma-u.5	100501371	uncharacterized LOC100501371
tae-r.2	123111423	protein DWARF 53
tae-r.2	123091704	protein DWARF 53
tae-r.2	123096667	protein DWARF 53
hvu-r.1	123448148	protein DWARF 53-like
hvu-r.1	123451806	protein DWARF 53-like
sbi-r.1	8067572	protein DWARF 53
sbi-r.1	8072902	protein DWARF 53
bdi-r.1	100845733	protein DWARF 53

Top 50 coexpressed genes to 100818456 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100818456 (gma-u.5 coexpression data)

CoexMap"100818456"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(756 genes)	IEA
GO:0005524 [list] [network] ATP binding	(3753 genes)	IEA

Protein

XP_006596423.1 [sequence] [blastp]
XP_006596424.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, cysk 1	(predict for XP_006596423.1)
nucl 6, cyto 1, cysk 1	(predict for XP_006596424.1)

Subcellular
localization
TargetP

other 5	(predict for XP_006596423.1)
other 5	(predict for XP_006596424.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100818456	gma-r.7 for 100818456	gma-u.5 for 100786125	gma-u.5 for 100776148	gma-u.5 for 100804458	mtr-u.5 for 25490895	mtr-u.5 for 11410353	mtr-u.5 for 11407081	ppo-u.5 for 7478524	ppo-u.5 for 7494498	ppo-u.5 for 7474431	ath-u.5 for AT2G29970	ath-u.5 for AT2G40130	ath-u.5 for AT1G07200	bra-r.6 for 103866977	bra-r.6 for 103867997	bra-r.6 for 103843477	vvi-u.5 for 100241532	vvi-u.5 for 100260392	ghi-r.1 for 107906628	ghi-r.1 for 107931843	ghi-r.1 for 107959196	bna-r.1 for 125578629	bna-r.1 for 106398255	bna-r.1 for 106377254	cit-r.1 for 102628359	cit-r.1 for 102625296	sly-u.5 for 101252191	sly-u.5 for 101247060	sot-r.1 for 102599854	sot-r.1 for 102606448	nta-r.1 for 107820835	nta-r.1 for 107803297	nta-r.1 for 107780452	osa-u.5 for 4349543	osa-u.5 for 4351252	zma-u.5 for 100501371	tae-r.2 for 123111423	tae-r.2 for 123091704	tae-r.2 for 123096667	hvu-r.1 for 123448148	hvu-r.1 for 123451806	sbi-r.1 for 8067572	sbi-r.1 for 8072902	bdi-r.1 for 100845733

Ortholog

Ortholog ID: 2205

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

protein SMAX1-LIKE 6

protein SMAX1-LIKE 8

protein SMAX1-LIKE 7

protein SMAX1-LIKE 8

protein SMAX1-LIKE 6

protein SMAX1-LIKE 8

protein SMAX1-LIKE 6

Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein

protein SMAX1-LIKE 8

protein SMAX1-LIKE 7

protein SMAX1-LIKE 6

protein SMAX1-LIKE 7

protein SMAX1-LIKE 8-like

protein SMAX1-LIKE 8

protein SMAX1-LIKE 7

protein SMAX1-LIKE 8-like

SMAX1-LIKE protein

uncharacterized LOC102599854

uncharacterized LOC102606448

protein SMAX1-LIKE 6

protein SMAX1-LIKE 6-like

protein SMAX1-LIKE 6

Protein DWARF 53

protein DWARF 53-LIKE-like

uncharacterized LOC100501371

protein DWARF 53

protein DWARF 53-LIKE

protein DWARF 53

protein DWARF 53-like

protein DWARF 53

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2
gma04981	Folate transport and metabolism	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit00010	Glycolysis / Gluconeogenesis	2
cit00071	Fatty acid degradation	2
cit00350	Tyrosine metabolism	2
cit00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	4
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100818456

100804458

100800606

25490895

11410353

11407081

7478524

7494498

7482347

817547

818604

837231

103866977

103867997

103843970

100241532

100260392

107906628

107960091

107904057

106398255

106377254

106420781

102628359

102625296

101252191

101247060

102599854

102606448

107820835

107780452

107772039

4349543

4351252

100501371

123096667

123086341

123103232

123448148

123451806

8067572

8072902

100845733

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	3	3	3	2	3	3	2	2	2	3	2	1	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100818456 (gma-u.5 coexpression data)

Top 50 enrichment test to 100818456 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**