ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100809845	alpha-ketoglutarate-dependent dioxygenase AlkB homolog
gma-u.5	100775999	alpha-ketoglutarate-dependent dioxygenase AlkB-like
mtr-u.5	120575952	uncharacterized LOC120575952
mtr-u.5	11425593	uncharacterized LOC11425593
ppo-u.5	7488769	uncharacterized LOC7488769
ppo-u.5	7461945	uncharacterized LOC7461945
ath-u.5	AT3G14160	2-oxoglutarate-dependent dioxygenase family protein
ath-u.5	AT5G01780	2-oxoglutarate-dependent dioxygenase family protein
vvi-u.5	100246527	uncharacterized LOC100246527
vvi-u.5	100263508	uncharacterized LOC100263508
osa-u.5	4334565	uncharacterized LOC4334565
zma-u.5	100273226	2-oxoglutarate-dependent dioxygenase family protein

functional annotation

KEGG

GO BP

GO:0035513 [list] [network] oxidative RNA demethylation

(5 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus	(5531 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(9233 genes)	IEA

GO MF

GO:0035515 [list] [network] oxidative RNA demethylase activity	(5 genes)	IEA
GO:0035516 [list] [network] broad specificity oxidative DNA demethylase activity	(5 genes)	IEA
GO:0008198 [list] [network] ferrous iron binding	(37 genes)	IEA

Protein

XP_003516417.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 1, nucl 1, pero 1, cyto_mito 1, mito_plas 1

(predict for XP_003516417.2)

Subcellular
localization
TargetP

chlo 7, mito 5

(predict for XP_003516417.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100809845	gma-u.5 for 100775999	mtr-u.5 for 120575952	mtr-u.5 for 11425593	ppo-u.5 for 7488769	ppo-u.5 for 7461945	ath-u.5 for AT3G14160	ath-u.5 for AT5G01780	vvi-u.5 for 100246527	vvi-u.5 for 100263508	osa-u.5 for 4334565	zma-u.5 for 100273226

Ortholog ID: 7207

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

osa

zma

tae

hvu

bdi

cre

Symbol

Function^*

alpha-ketoglutarate-dependent dioxygenase AlkB-like

uncharacterized LOC11425593

uncharacterized LOC120575952

uncharacterized LOC7488769

uncharacterized LOC7461945

2-oxoglutarate-dependent dioxygenase family protein

uncharacterized LOC103870060

uncharacterized LOC100263508

uncharacterized LOC100246527

uncharacterized LOC107914563

uncharacterized LOC107960284

uncharacterized LOC106452247

uncharacterized LOC111215716

uncharacterized LOC102630077

uncharacterized LOC102615514

uncharacterized LOC4334565

2-oxoglutarate-dependent dioxygenase family protein

uncharacterized LOC123105617

uncharacterized LOC123452969

uncharacterized LOC100841984

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	5
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	7
ghi00670	One carbon pool by folate	7
ghi00999	Biosynthesis of various plant secondary metabolites	7
ghi01230	Biosynthesis of amino acids	7
ghi01240	Biosynthesis of cofactors	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi00600	Sphingolipid metabolism	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00061	Fatty acid biosynthesis	2
bna00071	Fatty acid degradation	2
bna01212	Fatty acid metabolism	2
bna04146	Peroxisome	2
bna04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04517	IgSF CAM signaling	2
osa05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00970	Aminoacyl-tRNA biosynthesis	6
tae04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

100775999

11425593

120575952

7488769

7461945

820633

103870060

100263508

100246527

107914563

107960284

106452247

111215716

102630077

102615514

4334565

100273226

123105617

123452969

100841984

5722306

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100809845 (gma-u.5 coexpression data)

Top 50 enrichment test to 100809845 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	osa	zma	bdi	hvu	bra	cit	bna	sbi	sly	ghi	sot	nta	cre	tae
Paralog	2	2	2	2	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100809845 (gma-u.5 coexpression data)

Top 50 enrichment test to 100809845 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**