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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g412350v5   uncharacterized protein 
 ath-u.5   AT3G14160   2-oxoglutarate-dependent dioxygenase family protein 
 ath-u.5   AT5G01780   2-oxoglutarate-dependent dioxygenase family protein 
 gma-u.5   100809845   alpha-ketoglutarate-dependent dioxygenase AlkB homolog 
 gma-u.5   100775999   alpha-ketoglutarate-dependent dioxygenase AlkB-like 
 osa-u.5   4334565   uncharacterized LOC4334565 
 zma-u.5   100273226   2-oxoglutarate-dependent dioxygenase family protein 
 vvi-u.5   100263508   uncharacterized LOC100263508 
 vvi-u.5   100246527   uncharacterized LOC100246527 
 ppo-u.5   7488769   uncharacterized LOC7488769 
 ppo-u.5   7461945   uncharacterized LOC7461945 
 mtr-u.5   11425593   uncharacterized LOC11425593 
 mtr-u.5   120575952   uncharacterized LOC120575952 

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Top 50 coexpressed genes to CHLRE_09g412350v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g412350v5 (cre-r.1 coexpression data)

CoexMap"5722306"


creCHLRE_09g412350v5 | Entrez gene ID : 5722306    
Species cre ath gma osa zma vvi ppo mtr sly sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 2 2 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035513 [list] [network] oxidative RNA demethylation  (2 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (2907 genes)  IEA  
GO MF
GO:0035516 [list] [network] broad specificity oxidative DNA demethylase activity  (2 genes)  IEA  
GO:0035515 [list] [network] oxidative RNA demethylase activity  (3 genes)  IEA  
GO:0008198 [list] [network] ferrous iron binding  (13 genes)  IEA  
Protein XP_042921592.1 [sequence] [blastp]
XP_042921593.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_042921592.1)
nucl 4,  cyto 4,  chlo 1  (predict for XP_042921593.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for XP_042921592.1)
other 8,  mito 5  (predict for XP_042921593.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g412350v5

.
ath-u.5
for
AT3G14160

.
ath-u.5
for
AT5G01780

.
gma-u.5
for
100809845

.
gma-u.5
for
100775999

.
osa-u.5
for
4334565

.
zma-u.5
for
100273226

.
vvi-u.5
for
100263508

.
vvi-u.5
for
100246527

.
ppo-u.5
for
7488769

.
ppo-u.5
for
7461945

.
mtr-u.5
for
11425593

.
mtr-u.5
for
120575952

.


Ortholog ID: 7207
Species ath gma osa zma bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre cit cit bdi
Symbol AT3G14160 LOC100775999 LOC4334565 LOC100273226 LOC103870060 LOC100263508 LOC100246527 LOC7488769 LOC7461945 LOC11425593 LOC120575952 LOC123105617 LOC123452969 LOC107914563 LOC107960284 LOC106452247 LOC111215716 CHLRE_09g412350v5 LOC102630077 LOC102615514 LOC100841984
Function* 2-oxoglutarate-dependent dioxygenase family protein alpha-ketoglutarate-dependent dioxygenase AlkB-like uncharacterized LOC4334565 2-oxoglutarate-dependent dioxygenase family protein uncharacterized LOC103870060 uncharacterized LOC100263508 uncharacterized LOC100246527 uncharacterized LOC7488769 uncharacterized LOC7461945 uncharacterized LOC11425593 uncharacterized LOC120575952 uncharacterized LOC123105617 uncharacterized LOC123452969 uncharacterized LOC107914563 uncharacterized LOC107960284 uncharacterized LOC106452247 uncharacterized LOC111215716 uncharacterized protein uncharacterized LOC102630077 uncharacterized LOC102615514 uncharacterized LOC100841984
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04517 IgSF CAM signaling 2
osa05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 6
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 7
ghi00670 One carbon pool by folate 7
ghi00999 Biosynthesis of various plant secondary metabolites 7
ghi01230 Biosynthesis of amino acids 7
ghi01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi00600 Sphingolipid metabolism 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820633 100775999 4334565 100273226 103870060 100263508 100246527 7488769 7461945 11425593 120575952 123105617 123452969 107914563 107960284 106452247 111215716 5722306 102630077 102615514 100841984
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