ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100818714	ABC transporter C family member 3
gma-r.7	100818714	ABC transporter C family member 3
gma-m.5	100818714	ABC transporter C family member 3
gma-u.5	100811245	ABC transporter C family member 3-like
gma-u.5	100775358	ABC transporter C family member 3
gma-u.5	100776443	ABC transporter C family member 3
mtr-u.5	25489080	ABC transporter C family member 3
mtr-u.5	11408628	ABC transporter C family member 3
mtr-u.5	11406315	ABC transporter C family member 3
ppo-u.5	7485090	ABC transporter C family member 3-like
ppo-u.5	7462791	ABC transporter C family member 3
ath-u.5	ABCC3	multidrug resistance-associated protein 3
ath-u.5	ABCC6	multidrug resistance-associated protein 8
ath-u.5	ABCC7	multidrug resistance-associated protein 7
bra-r.6	103870195	ABC transporter C family member 7
bra-r.6	103859499	ABC transporter C family member 3
bra-r.6	103859497	ABC transporter C family member 3
ghi-r.1	107897426	ABC transporter C family member 3
ghi-r.1	107927206	ABC transporter C family member 3
ghi-r.1	121203122	ABC transporter C family member 3
bna-r.1	106372557	ABC transporter C family member 7
bna-r.1	106377508	ABC transporter C family member 3
bna-r.1	106377513	ABC transporter C family member 6
cit-r.1	102618513	ABC transporter C family member 3-like
cit-r.1	102618233	ABC transporter C family member 3-like
cit-r.1	102621957	ABC transporter C family member 3-like
sly-u.5	ABCC5	ABC transporter C family member 5
sot-r.1	102590403	ABC transporter C family member 3
nta-r.1	107783438	ABC transporter C family member 3
nta-r.1	107818627	ABC transporter C family member 3-like
nta-r.1	107829559	ABC transporter C family member 3
osa-u.5	4329047	ABC transporter C family member 3
osa-u.5	4327122	ABC transporter C family member 3
zma-u.5	100274125	uncharacterized LOC100274125
zma-u.5	542680	uncharacterized LOC542680
zma-u.5	109941983	ABC transporter C family member 3
tae-r.2	542957	ABC transporter C family member 3
tae-r.2	123060539	ABC transporter C family member 3
hvu-r.1	123444907	ABC transporter C family member 3-like
hvu-r.1	123443045	ABC transporter C family member 3-like
sbi-r.1	8059825	ABC transporter C family member 3
sbi-r.1	8078474	ABC transporter C family member 3
sbi-r.1	8081456	ABC transporter C family member 3
bdi-r.1	100842637	ABC transporter C family member 3
bdi-r.1	100825907	ABC transporter C family member 3

Top 50 coexpressed genes to 100818714 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100818714 (gma-u.5 coexpression data)

CoexMap"100818714"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx02010 [list] [network] ABC transporters (136 genes)

gmx04981 [list] [network] Folate transport and metabolism (82 genes)

GO BP

GO:0055085 [list] [network] transmembrane transport

(1780 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(5894 genes)

IEA

GO MF

GO:0140359 [list] [network] ABC-type transporter activity	(197 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(756 genes)	IEA
GO:0005524 [list] [network] ATP binding	(3753 genes)	IEA

Protein

XP_003519622.1 [sequence] [blastp]
XP_014626241.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, plas 4, vacu 1, E.R. 1, golg 1, E.R._vacu 1	(predict for XP_003519622.1)
chlo 6, plas 2, vacu 1, E.R._plas 1	(predict for XP_014626241.1)

Subcellular
localization
TargetP

scret 7	(predict for XP_003519622.1)
scret 7	(predict for XP_014626241.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100818714	gma-r.7 for 100818714	gma-m.5 for 100818714	gma-u.5 for 100811245	gma-u.5 for 100775358	gma-u.5 for 100776443	mtr-u.5 for 25489080	mtr-u.5 for 11408628	mtr-u.5 for 11406315	ppo-u.5 for 7485090	ppo-u.5 for 7462791	ath-u.5 for ABCC3	ath-u.5 for ABCC6	ath-u.5 for ABCC7	bra-r.6 for 103870195	bra-r.6 for 103859499	bra-r.6 for 103859497	ghi-r.1 for 107897426	ghi-r.1 for 107927206	ghi-r.1 for 121203122	bna-r.1 for 106372557	bna-r.1 for 106377508	bna-r.1 for 106377513	cit-r.1 for 102618513	cit-r.1 for 102618233	cit-r.1 for 102621957	sly-u.5 for ABCC5	sot-r.1 for 102590403	nta-r.1 for 107783438	nta-r.1 for 107818627	nta-r.1 for 107829559	osa-u.5 for 4329047	osa-u.5 for 4327122	zma-u.5 for 100274125	zma-u.5 for 542680	zma-u.5 for 109941983	tae-r.2 for 542957	tae-r.2 for 123060539	hvu-r.1 for 123444907	hvu-r.1 for 123443045	sbi-r.1 for 8059825	sbi-r.1 for 8078474	sbi-r.1 for 8081456	bdi-r.1 for 100842637	bdi-r.1 for 100825907

Ortholog

Ortholog ID: 1385

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

ABCC3

ABCC6

ABCC7

ABCC5

Function^*