ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100818738	protein YIPF1 homolog
gma-r.7	100818738	protein YIPF1 homolog
gma-m.5	100818738	protein YIPF1 homolog
gma-u.5	100810521	protein YIPF1 homolog
gma-u.5	100813483	protein YIPF1 homolog
mtr-u.5	11406063	protein YIPF1 homolog
mtr-u.5	11413778	protein YIPF1 homolog
mtr-u.5	11422593	protein YIPF1 homolog
ppo-u.5	7487980	uncharacterized LOC7487980
ppo-u.5	18098793	uncharacterized LOC18098793
ppo-u.5	7458116	uncharacterized LOC7458116
ath-u.5	AT2G39805	Integral membrane Yip1 family protein
ath-u.5	AT3G05280	Integral membrane Yip1 family protein
ath-u.5	AT5G27490	Integral membrane Yip1 family protein
bra-r.6	103865747	protein YIPF1 homolog
bra-r.6	103848998	protein YIPF1 homolog
vvi-u.5	100266603	uncharacterized LOC100266603
vvi-u.5	100249608	uncharacterized LOC100249608
ghi-r.1	107893276	protein YIPF1 homolog
ghi-r.1	107897310	protein YIPF1 homolog
ghi-r.1	107904132	protein YIPF1 homolog
bna-r.1	125587971	protein YIPF1 homolog
bna-r.1	106450267	protein YIPF1 homolog
bna-r.1	125590384	protein YIPF1 homolog
cit-r.1	102609417	uncharacterized LOC102609417
cit-r.1	102615988	uncharacterized LOC102615988
sly-u.5	101263468	uncharacterized LOC101263468
sly-u.5	101250218	uncharacterized LOC101250218
sot-r.1	102580575	protein YIPF1 homolog
sot-r.1	102593708	protein YIPF1 homolog
nta-r.1	107790713	uncharacterized LOC107790713
nta-r.1	107788889	uncharacterized LOC107788889
nta-r.1	107812454	uncharacterized LOC107812454
osa-u.5	4327734	uncharacterized LOC4327734
osa-u.5	4338982	uncharacterized LOC4338982
zma-u.5	100193527	uncharacterized LOC100193527
zma-u.5	100274373	uncharacterized LOC100274373
zma-u.5	100194180	uncharacterized LOC100194180
tae-r.2	123061451	protein YIPF1 homolog
tae-r.2	123058709	protein YIPF1 homolog
tae-r.2	123070095	protein YIPF1 homolog
hvu-r.1	123445603	protein YIPF1 homolog
hvu-r.1	123443858	protein YIPF1 homolog
sbi-r.1	8061757	protein YIPF1 homolog
sbi-r.1	8084812	protein YIPF1 homolog
bdi-r.1	100821203	protein YIPF1 homolog
bdi-r.1	100821301	protein YIPF1 homolog
cre-r.1	CHLRE_17g722700v5	uncharacterized protein

Top 50 coexpressed genes to 100818738 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100818738 (gma-u.5 coexpression data)

CoexMap"100818738"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0016192 [list] [network] vesicle-mediated transport

(892 genes)

IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus	(934 genes)	IEA
GO:0016020 [list] [network] membrane	(5894 genes)	IEA

GO MF

GO:0031267 [list] [network] small GTPase binding

(49 genes)

IEA

Protein

XP_003521710.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, cyto 1, E.R. 1, cyto_E.R. 1, chlo 1, nucl 1, mito 1, extr 1, vacu 1, chlo_mito 1, cyto_pero 1

(predict for XP_003521710.1)

Subcellular
localization
TargetP

other 5

(predict for XP_003521710.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100818738	gma-r.7 for 100818738	gma-m.5 for 100818738	gma-u.5 for 100810521	gma-u.5 for 100813483	mtr-u.5 for 11406063	mtr-u.5 for 11413778	mtr-u.5 for 11422593	ppo-u.5 for 7487980	ppo-u.5 for 18098793	ppo-u.5 for 7458116	ath-u.5 for AT2G39805	ath-u.5 for AT3G05280	ath-u.5 for AT5G27490	bra-r.6 for 103865747	bra-r.6 for 103848998	vvi-u.5 for 100266603	vvi-u.5 for 100249608	ghi-r.1 for 107893276	ghi-r.1 for 107897310	ghi-r.1 for 107904132	bna-r.1 for 125587971	bna-r.1 for 106450267	bna-r.1 for 125590384	cit-r.1 for 102609417	cit-r.1 for 102615988	sly-u.5 for 101263468	sly-u.5 for 101250218	sot-r.1 for 102580575	sot-r.1 for 102593708	nta-r.1 for 107790713	nta-r.1 for 107788889	nta-r.1 for 107812454	osa-u.5 for 4327734	osa-u.5 for 4338982	zma-u.5 for 100193527	zma-u.5 for 100274373	zma-u.5 for 100194180	tae-r.2 for 123061451	tae-r.2 for 123058709	tae-r.2 for 123070095	hvu-r.1 for 123445603	hvu-r.1 for 123443858	sbi-r.1 for 8061757	sbi-r.1 for 8084812	bdi-r.1 for 100821203	bdi-r.1 for 100821301	cre-r.1 for CHLRE_17g722700v5

Ortholog

Ortholog ID: 1795

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein YIPF1 homolog

uncharacterized LOC18098793

uncharacterized LOC7458116

uncharacterized LOC7473296

Integral membrane Yip1 family protein

protein YIPF1 homolog

uncharacterized LOC100266603

uncharacterized LOC100249608

protein YIPF1 homolog

uncharacterized LOC102609417

uncharacterized LOC102615988

uncharacterized LOC101263468

uncharacterized LOC101250218

protein YIPF1 homolog

uncharacterized LOC107788889

uncharacterized LOC107812454

uncharacterized LOC107798296

uncharacterized LOC4327734

uncharacterized LOC4338982

uncharacterized LOC100193527

uncharacterized LOC100274373

uncharacterized LOC100194180

protein YIPF1 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	3
gma04142	Lysosome	2
gma04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	6
gma00190	Oxidative phosphorylation	5
gma04142	Lysosome	4
gma04144	Endocytosis	2
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	4
bra04142	Lysosome	3
bra05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	3
vvi00190	Oxidative phosphorylation	2
vvi04144	Endocytosis	2
vvi04130	SNARE interactions in vesicular transport	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3
cit04145	Phagosome	3
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03060	Protein export	2
sly04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	3
sot04141	Protein processing in endoplasmic reticulum	2
sot00440	Phosphonate and phosphinate metabolism	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	3
osa03015	mRNA surveillance pathway	3
osa03060	Protein export	3
osa00513	Various types of N-glycan biosynthesis	2
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2
zma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00040	Pentose and glucuronate interconversions	3
tae00053	Ascorbate and aldarate metabolism	3
tae00561	Glycerolipid metabolism	3
tae00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	2
tae04136	Autophagy - other	2
tae04382	Cornified envelope formation	2
tae04141	Protein processing in endoplasmic reticulum	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	4
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	3
bdi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	4

Expression

Expression pattern

Entrez Gene ID^*

100818738

100810521

100780622

11413778

11422593

11434181

18098793

7458116

7473296

818567

819692

832808

103848998

103870835

100266603

100249608

107893276

121207812

107935334

125587971

111214113

106391558

102609417

102615988

101263468

101250218

102580575

102593708

107788889

107812454

107798296

4327734

4338982

100193527

100274373

100194180

123058709

123078543

123135753

123445603

123443858

8061757

8084812

100821203

100821301

5722716

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	3	3	2	2	3	3	2	2	2	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100818738 (gma-u.5 coexpression data)

Top 50 enrichment test to 100818738 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**