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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100818820   probable polygalacturonase 
 gma-r.7   100818820   probable polygalacturonase 
 gma-m.5   100818820   probable polygalacturonase 
 gma-u.5   100785590   probable polygalacturonase 
 gma-u.5   100816170   probable polygalacturonase 
 mtr-u.5   11437037   probable polygalacturonase 
 mtr-u.5   25490549   probable polygalacturonase 
 ppo-u.5   7497842   probable polygalacturonase 
 ath-u.5   AT4G23820   Pectin lyase-like superfamily protein 
 ath-u.5   AT5G41870   Pectin lyase-like superfamily protein 
 bra-r.6   103861440   probable polygalacturonase 
 bra-r.6   103850234   probable polygalacturonase 
 bra-r.6   103861445   probable polygalacturonase 
 vvi-u.5   100250089   probable polygalacturonase 
 ghi-r.1   107904469   probable polygalacturonase 
 ghi-r.1   107909932   probable polygalacturonase 
 ghi-r.1   107924269   probable polygalacturonase 
 bna-r.1   125576581   probable polygalacturonase 
 bna-r.1   106441481   probable polygalacturonase 
 bna-r.1   106438447   probable polygalacturonase 
 cit-r.1   102613856   probable polygalacturonase 
 sly-u.5   101258581   probable polygalacturonase 
 sot-r.1   102591521   probable polygalacturonase 
 nta-r.1   107816298   putative polygalacturonase 
 nta-r.1   107795962   putative polygalacturonase 
 osa-u.5   4339762   probable polygalacturonase 
 osa-u.5   4326618   probable polygalacturonase 
 zma-u.5   100384246   uncharacterized LOC100384246 
 zma-u.5   100283011   uncharacterized LOC100283011 
 zma-u.5   100273574   uncharacterized LOC100273574 
 tae-r.2   123078585   probable polygalacturonase 
 tae-r.2   123070151   probable polygalacturonase 
 hvu-r.1   123443896   probable polygalacturonase 
 sbi-r.1   8078349   probable polygalacturonase 
 sbi-r.1   8066541   probable polygalacturonase 
 sbi-r.1   8054394   probable polygalacturonase 
 bdi-r.1   100831849   probable polygalacturonase 

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Top 50 coexpressed genes to 100818820 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100818820 (gma-u.5 coexpression data)

CoexMap"100818820"


gmaLOC100818820 | Entrez gene ID : 100818820      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 1 2 3 1 3 3 1 1 1 2 2 3 2 1 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1295 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (99 genes)  IEA  
Protein XP_003545367.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  E.R. 2,  cyto 1,  vacu 1,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_003545367.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_003545367.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100818820
gma-r.7
for
100818820
gma-m.5
for
100818820
gma-u.5
for
100785590
gma-u.5
for
100816170
mtr-u.5
for
11437037
mtr-u.5
for
25490549
ppo-u.5
for
7497842
ath-u.5
for
AT4G23820
ath-u.5
for
AT5G41870
bra-r.6
for
103861440
bra-r.6
for
103850234
bra-r.6
for
103861445
vvi-u.5
for
100250089
ghi-r.1
for
107904469
ghi-r.1
for
107909932
ghi-r.1
for
107924269
bna-r.1
for
125576581
bna-r.1
for
106441481
bna-r.1
for
106438447
cit-r.1
for
102613856
sly-u.5
for
101258581
sot-r.1
for
102591521
nta-r.1
for
107816298
nta-r.1
for
107795962
osa-u.5
for
4339762
osa-u.5
for
4326618
zma-u.5
for
100384246
zma-u.5
for
100283011
zma-u.5
for
100273574
tae-r.2
for
123078585
tae-r.2
for
123070151
hvu-r.1
for
123443896
sbi-r.1
for
8078349
sbi-r.1
for
8066541
sbi-r.1
for
8054394
bdi-r.1
for
100831849


Ortholog ID: 4953
Species gma gma gma mtr mtr ppo ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma zma tae tae hvu sbi sbi sbi bdi
Symbol LOC100818820 LOC100785590 LOC100816170 LOC11437037 LOC25490549 LOC7497842 AT4G23820 AT5G41870 LOC103861440 LOC103850234 LOC103861445 LOC100250089 LOC107909932 LOC107924269 LOC107928776 LOC106441481 LOC106438447 LOC106366733 LOC102613856 LOC101258581 LOC102591521 LOC107816298 LOC107795962 LOC4339762 LOC4326618 LOC100384246 LOC100283011 LOC100273574 LOC123078585 LOC123070151 LOC123443896 LOC8078349 LOC8066541 LOC8054394 LOC100831849
Function* probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase putative polygalacturonase putative polygalacturonase probable polygalacturonase probable polygalacturonase uncharacterized LOC100384246 uncharacterized LOC100283011 uncharacterized LOC100273574 probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00270 Cysteine and methionine metabolism 2
mtr00330 Arginine and proline metabolism 2
mtr00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00905 Brassinosteroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 4
sbi01200 Carbon metabolism 4
sbi00190 Oxidative phosphorylation 4
sbi00270 Cysteine and methionine metabolism 2
sbi00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
bdi01240 Biosynthesis of cofactors 2
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100818820 100785590 100816170 11437037 25490549 7497842 828482 834192 103861440 103850234 103861445 100250089 107909932 107924269 107928776 106441481 106438447 106366733 102613856 101258581 102591521 107816298 107795962 4339762 4326618 100384246 100283011 100273574 123078585 123070151 123443896 8078349 8066541 8054394 100831849
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