ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100819017	casein kinase 1-like protein 2
gma-r.7	100819017	casein kinase 1-like protein 2
gma-m.5	100819017	casein kinase 1-like protein 2
gma-u.5	100783824	casein kinase 1-like protein 6
gma-u.5	100782913	casein kinase 1-like protein 3
gma-u.5	100781494	casein kinase 1-like protein 6
mtr-u.5	25490124	casein kinase I
mtr-u.5	11420813	casein kinase 1-like protein 10
mtr-u.5	11429296	casein kinase 1-like protein 10
ppo-u.5	18107696	casein kinase 1-like protein 2
ppo-u.5	7467543	casein kinase 1-like protein 10
ppo-u.5	7471533	casein kinase 1-like protein 3
ath-u.5	ckl5	casein kinase I-like 5
ath-u.5	CKL2	casein kinase 1-like protein 2
ath-u.5	CKL13	casein kinase like 13
vvi-u.5	100244694	casein kinase 1-like protein 2
vvi-u.5	100265228	casein kinase 1-like protein 10
vvi-u.5	100242639	casein kinase 1-like protein 10
sly-u.5	101254665	protein kinase superfamily protein
sly-u.5	101267121	casein kinase 1-like protein 10
sly-u.5	101260071	casein kinase 1-like protein 3
osa-u.5	4325891	casein kinase 1-like protein 3
osa-u.5	4329020	casein kinase 1-like protein 3
osa-u.5	4330018	casein kinase 1-like
zma-u.5	103630795	casein kinase 1-like protein 2
zma-u.5	100285265	casein kinase I
zma-u.5	100273747	casein kinase 1-like protein 2

Top 50 coexpressed genes to 100819017 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100819017 (gma-u.5 coexpression data)

CoexMap"100819017"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006897 [list] [network] endocytosis	(148 genes)	IEA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(168 genes)	IEA
GO:0007165 [list] [network] signal transduction	(1441 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus	(5531 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(9233 genes)	IEA

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(848 genes)	IEA
GO:0005524 [list] [network] ATP binding	(3753 genes)	IEA

Protein

XP_006585502.1 [sequence] [blastp]
XP_006585503.1 [sequence] [blastp]
XP_040874228.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, cysk_nucl 2, plas 1, golg_plas 1, cyto_E.R. 1	(predict for XP_006585502.1)
nucl 4, cyto 2, cysk_nucl 2, plas 1, golg_plas 1, cyto_E.R. 1	(predict for XP_006585503.1)
nucl 6, cyto 2, mito 1, pero 1, cysk 1	(predict for XP_040874228.1)

Subcellular
localization
TargetP

other 6, mito 3	(predict for XP_006585502.1)
other 6, mito 3	(predict for XP_006585503.1)
other 6, scret 3	(predict for XP_040874228.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100819017	gma-r.7 for 100819017	gma-m.5 for 100819017	gma-u.5 for 100783824	gma-u.5 for 100782913	gma-u.5 for 100781494	mtr-u.5 for 25490124	mtr-u.5 for 11420813	mtr-u.5 for 11429296	ppo-u.5 for 18107696	ppo-u.5 for 7467543	ppo-u.5 for 7471533	ath-u.5 for ckl5	ath-u.5 for CKL2	ath-u.5 for CKL13	vvi-u.5 for 100244694	vvi-u.5 for 100265228	vvi-u.5 for 100242639	sly-u.5 for 101254665	sly-u.5 for 101267121	sly-u.5 for 101260071	osa-u.5 for 4325891	osa-u.5 for 4329020	osa-u.5 for 4330018	zma-u.5 for 103630795	zma-u.5 for 100285265	zma-u.5 for 100273747

Ortholog

Ortholog ID: 103

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CK1

CKL6

Function^*

casein kinase 1-like protein 3

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase I

casein kinase 1-like protein 10

casein kinase 1-like protein 2

casein kinase 1

casein kinase I-like 6

casein kinase 1-like protein 5

casein kinase 1-like protein 12

casein kinase 1-like protein 10

casein kinase 1-like protein 3

casein kinase 1-like protein 10

casein kinase 1-like protein 7

casein kinase 1-like protein 12

casein kinase 1-like protein 6

casein kinase 1-like protein 10

protein kinase superfamily protein

casein kinase 1-like protein 2

casein kinase I

casein kinase 1-like protein 11

uncharacterized LOC107769362

casein kinase 1-like protein 3

casein kinase 1-like

putative casein kinase family protein

casein kinase I

casein kinase 1-like protein 1

casein kinase I

casein kinase 1-like protein 2

casein kinase I-like

casein kinase 1-like protein 2

casein kinase 1-like protein 3

casein kinase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04517	IgSF CAM signaling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	3
bra03420	Nucleotide excision repair	3
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
ghi00190	Oxidative phosphorylation	2
ghi00860	Porphyrin metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2
ghi04144	Endocytosis	2
ghi04814	Motor proteins	2
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00510	N-Glycan biosynthesis	2
cit00513	Various types of N-glycan biosynthesis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00030	Pentose phosphate pathway	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	4
sot03250	Viral life cycle - HIV-1	2
sot03272	Virion - Hepatitis viruses	2
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	5
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2
zma00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae03060	Protein export	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	5
hvu04626	Plant-pathogen interaction	3
hvu04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03015	mRNA surveillance pathway	3
cre04382	Cornified envelope formation	2

Expression

Expression pattern

Entrez Gene ID^*

100805890

100804897

11430421

25481844

7467543

7485740

828716

828972

103837959

103851790

100265228

100247344

107936256

107926818

106416395

106389778

102631472

102626357

101254665

101258260

102598967

102592835

107818766

107769362

4325891

4336396

100383522

100285265

123069955

123078410

123444240

123401749

8066565

110433550

100838167

100835656

5719647

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	6	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100819017 (gma-u.5 coexpression data)

Top 50 enrichment test to 100819017 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**