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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100820122   vesicle-associated protein 2-1 
 gma-r.7   100820122   vesicle-associated protein 2-1 
 gma-m.5   100820122   vesicle-associated protein 2-1 
 gma-u.5   100801987   vesicle-associated protein 2-2-like 
 gma-u.5   100805159   vesicle-associated protein 1-2 
 gma-u.5   100816526   vesicle-associated protein 1-3-like 
 mtr-u.5   11420741   vesicle-associated protein 1-2 
 mtr-u.5   120577098   vesicle-associated protein 1-2 
 ppo-u.5   18094566   vesicle-associated protein 2-1 
 ppo-u.5   18098887   vesicle-associated protein 1-2 
 ppo-u.5   18105191   vesicle-associated protein 1-2 
 ath-u.5   VAP27-2   vamp/synaptobrevin-associated protein 27-2 
 ath-u.5   PVA12   plant VAP homolog 12 
 vvi-u.5   100255313   vesicle-associated protein 2-1 
 vvi-u.5   100253999   vesicle-associated protein 1-1 
 vvi-u.5   100253897   vesicle-associated protein 1-3 
 sly-u.5   101245885   vesicle-associated membrane protein 
 sly-u.5   101260955   vesicle-associated protein 2-1-like 
 sly-u.5   101264447   vesicle-associated protein 1-1-like 
 osa-u.5   112936046   vesicle-associated protein 1-3 
 osa-u.5   4326527   vesicle-associated protein 2-2 
 osa-u.5   9270104   vesicle-associated protein 2-1 
 zma-u.5   100286234   vesicle-associated membrane protein-associated protein A 
 zma-u.5   100278349   uncharacterized LOC100278349 
 zma-u.5   100280363   uncharacterized LOC100280363 

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Top 50 coexpressed genes to 100820122 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100820122 (gma-u.5 coexpression data)

CoexMap"100820122"


gmaLOC100820122 | Entrez gene ID : 100820122      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061817 [list] [network] endoplasmic reticulum-plasma membrane tethering  (25 genes)  IEA  
GO:0090158 [list] [network] endoplasmic reticulum membrane organization  (31 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (411 genes)  IEA  
GO:0005886 [list] [network] plasma membrane  (1870 genes)  IEA  
GO MF
Protein XP_003549940.1 [sequence] [blastp]
XP_006600852.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 3,  golg 3,  nucl 1,  vacu 1,  golg_plas 1  (predict for XP_003549940.1)
extr 3,  golg 3,  nucl 1,  vacu 1,  golg_plas 1  (predict for XP_006600852.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003549940.1)
other 8  (predict for XP_006600852.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100820122

.
gma-r.7
for
100820122

.
gma-m.5
for
100820122

.
gma-u.5
for
100801987

.
gma-u.5
for
100805159

.
gma-u.5
for
100816526

.
mtr-u.5
for
11420741

.
mtr-u.5
for
120577098

.
ppo-u.5
for
18094566

.
ppo-u.5
for
18098887

.
ppo-u.5
for
18105191

.
ath-u.5
for
VAP27-2

.
ath-u.5
for
PVA12

.
vvi-u.5
for
100255313

.
vvi-u.5
for
100253999

.
vvi-u.5
for
100253897

.
sly-u.5
for
101245885

.
sly-u.5
for
101260955

.
sly-u.5
for
101264447

.
osa-u.5
for
112936046

.
osa-u.5
for
4326527

.
osa-u.5
for
9270104

.
zma-u.5
for
100286234

.
zma-u.5
for
100278349

.
zma-u.5
for
100280363

.


Ortholog ID: 149
Species ath gma sly sly osa osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol VAP27-2 LOC100798247 LOC101251624 LOC101264447 LOC9270104 LOC112936046 LOC100217097 LOC103843379 LOC103839543 LOC100247810 LOC100253999 LOC7453954 LOC7471620 LOC11424030 LOC123144974 LOC123189780 LOC123427348 LOC107886082 LOC107891989 LOC106416681 LOC111215152 CHLRE_03g196900v5 LOC8062286 LOC8077921 LOC102594610 LOC102583399 LOC102611975 LOC102630951 LOC100841035 LOC100821088 LOC107782406 LOC107787792
Function* vamp/synaptobrevin-associated protein 27-2 vesicle-associated protein 1-2 vesicle-associated protein 2-2 vesicle-associated protein 1-1-like vesicle-associated protein 2-1 vesicle-associated protein 1-3 uncharacterized LOC100217097 vesicle-associated protein 2-2 vesicle-associated protein 2-1 vesicle-associated protein 1-2 vesicle-associated protein 1-1 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 1-2 vesicle-associated protein 2-1 vesicle-associated protein 1-2 vesicle-associated protein 1-2-like vesicle-associated protein 1-2 vesicle-associated protein 2-2 vesicle-associated protein 2-1 vesicle-associated protein 1-1-like uncharacterized protein vesicle-associated protein 1-1 vesicle-associated protein 2-2 vesicle-associated protein 2-1 vesicle-associated protein 1-1-like vesicle-associated protein 1-2 vesicle-associated protein 2-1 vesicle-associated protein 2-1 vesicle-associated protein 2-2 vesicle-associated protein 2-1-like vesicle-associated protein 2-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 7
gma01200 Carbon metabolism 7
gma00640 Propanoate metabolism 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 5
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 6
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ppo00230 Purine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 4
tae04148 Efferocytosis 4
tae04517 IgSF CAM signaling 4
tae04518 Integrin signaling 4
tae04620 Toll-like receptor signaling pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 11
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03030 DNA replication 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00100 Steroid biosynthesis 2
ghi04144 Endocytosis 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03022 Basal transcription factors 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04148 Efferocytosis 2
bdi00564 Glycerophospholipid metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00100 Steroid biosynthesis 4
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta00330 Arginine and proline metabolism 2
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837404 100798247 101251624 101264447 9270104 112936046 100217097 103843379 103839543 100247810 100253999 7453954 7471620 11424030 123144974 123189780 123427348 107886082 107891989 106416681 111215152 5718770 8062286 8077921 102594610 102583399 102611975 102630951 100841035 100821088 107782406 107787792
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