ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100820472	uncharacterized LOC100820472
gma-r.7	100820472	uncharacterized LOC100820472
gma-m.5	100820472	uncharacterized LOC100820472
gma-u.5	100813397	uncharacterized LOC100813397
gma-u.5	100809057	uncharacterized LOC100809057
gma-u.5	100781733	uncharacterized LOC100781733
mtr-u.5	11415070	uncharacterized LOC11415070
mtr-u.5	25484546	uncharacterized LOC25484546
ppo-u.5	18106697	uncharacterized LOC18106697
ppo-u.5	7494375	uncharacterized LOC7494375
ath-u.5	AT1G17940	Endosomal targeting BRO1-like domain-containing protein
ath-u.5	AT1G73390	Endosomal targeting BRO1-like domain-containing protein
bra-r.6	103872572	uncharacterized LOC103872572
bra-r.6	103831822	uncharacterized LOC103831822
vvi-u.5	100242158	uncharacterized LOC100242158
vvi-u.5	100266486	uncharacterized LOC100266486
ghi-r.1	107898417	uncharacterized LOC107898417
ghi-r.1	107904752	uncharacterized LOC107904752
ghi-r.1	107943083	uncharacterized LOC107943083
bna-r.1	BNAA06G12190D	uncharacterized BNAA06G12190D
bna-r.1	106354281	uncharacterized LOC106354281
bna-r.1	BNAC05G13880D	uncharacterized BNAC05G13880D
cit-r.1	102616443	hypothetical protein
sly-u.5	101254569	uncharacterized LOC101254569
sot-r.1	102579226	uncharacterized LOC102579226
nta-r.1	107790333	uncharacterized LOC107790333
nta-r.1	107776003	uncharacterized LOC107776003
osa-u.5	4331227	uncharacterized LOC4331227
osa-u.5	4336460	uncharacterized LOC4336460
zma-u.5	100277506	Endosomal targeting BRO1-like domain-containing protein
zma-u.5	100192509	uncharacterized LOC100192509
tae-r.2	123046057	uncharacterized LOC123046057
tae-r.2	123053938	uncharacterized LOC123053938
tae-r.2	123127819	uncharacterized LOC123127819
hvu-r.1	123403902	uncharacterized LOC123403902
hvu-r.1	123403822	uncharacterized LOC123403822
hvu-r.1	123427300	uncharacterized LOC123427300
sbi-r.1	8074801	uncharacterized LOC8074801
sbi-r.1	110436273	uncharacterized LOC110436273
bdi-r.1	100827277	uncharacterized LOC100827277
bdi-r.1	100822763	uncharacterized LOC100822763
bdi-r.1	100829154	uncharacterized LOC100829154

Top 50 coexpressed genes to 100820472 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100820472 (gma-u.5 coexpression data)

CoexMap"100820472"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003534075.1 [sequence] [blastp]
XP_014617691.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, cyto 1, cysk 1, cyto_nucl 1, cysk_nucl 1	(predict for XP_003534075.1)
chlo 8, nucl 1, cyto 1, cysk 1, cyto_nucl 1, cysk_nucl 1	(predict for XP_014617691.1)

Subcellular
localization
TargetP

other 5	(predict for XP_003534075.1)
other 5	(predict for XP_014617691.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100820472	gma-r.7 for 100820472	gma-m.5 for 100820472	gma-u.5 for 100813397	gma-u.5 for 100809057	gma-u.5 for 100781733	mtr-u.5 for 11415070	mtr-u.5 for 25484546	ppo-u.5 for 18106697	ppo-u.5 for 7494375	ath-u.5 for AT1G17940	ath-u.5 for AT1G73390	bra-r.6 for 103872572	bra-r.6 for 103831822	vvi-u.5 for 100242158	vvi-u.5 for 100266486	ghi-r.1 for 107898417	ghi-r.1 for 107904752	ghi-r.1 for 107943083	bna-r.1 for BNAA06G12190D	bna-r.1 for 106354281	bna-r.1 for BNAC05G13880D	cit-r.1 for 102616443	sly-u.5 for 101254569	sot-r.1 for 102579226	nta-r.1 for 107790333	nta-r.1 for 107776003	osa-u.5 for 4331227	osa-u.5 for 4336460	zma-u.5 for 100277506	zma-u.5 for 100192509	tae-r.2 for 123046057	tae-r.2 for 123053938	tae-r.2 for 123127819	hvu-r.1 for 123403902	hvu-r.1 for 123403822	hvu-r.1 for 123427300	sbi-r.1 for 8074801	sbi-r.1 for 110436273	bdi-r.1 for 100827277	bdi-r.1 for 100822763	bdi-r.1 for 100829154

Ortholog

Ortholog ID: 3744

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100813397

uncharacterized LOC100809057

uncharacterized LOC100781733

uncharacterized LOC11415070

uncharacterized LOC25484546

uncharacterized LOC18106697

uncharacterized LOC7494375

Endosomal targeting BRO1-like domain-containing protein

uncharacterized LOC103872572

uncharacterized LOC103831822

uncharacterized LOC100242158

uncharacterized LOC100266486

uncharacterized LOC107898417

uncharacterized LOC107943083

uncharacterized LOC121224456

uncharacterized BNAA06G12190D

uncharacterized LOC106354281

uncharacterized BNAC05G13880D

hypothetical protein

uncharacterized LOC101254569

uncharacterized LOC102579226

uncharacterized LOC107790333

uncharacterized LOC107776003

uncharacterized LOC4331227

uncharacterized LOC4336460

Endosomal targeting BRO1-like domain-containing protein

uncharacterized LOC100192509

uncharacterized LOC123127819

uncharacterized LOC123137586

uncharacterized LOC123403902

uncharacterized LOC123403822

uncharacterized LOC123427300

uncharacterized LOC8074801

uncharacterized LOC110436273

uncharacterized LOC100827277

uncharacterized LOC100822763

uncharacterized LOC100829154

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	3
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	4
mtr04145	Phagosome	2
mtr04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	2
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04075	Plant hormone signal transduction	3
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi01250	Biosynthesis of nucleotide sugars	3
vvi00040	Pentose and glucuronate interconversions	2
vvi00052	Galactose metabolism	2
vvi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4
vvi03040	Spliceosome	2
vvi04144	Endocytosis	2
vvi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	5
sly04016	MAPK signaling pathway - plant	3
sly00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	5
sot04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	7
nta04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	7
nta04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	10
osa04016	MAPK signaling pathway - plant	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3

Expression

Expression pattern

Entrez Gene ID^*

100813397

100809057

100781733

11415070

25484546

18106697

7494375

838373

843674

103872572

103831822

100242158

100266486

107898417

107943083

121224456

106346833

106354281

106427163

102616443

101254569

102579226

107790333

107776003

4331227

4336460

100277506

100192509

123127819

123137586

123403902

123403822

123427300

8074801

110436273

100827277

100822763

100829154

The preparation time of this page was 0.1 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	2	2	2	2	2	3	3	1	1	1	2	2	2	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100820472 (gma-u.5 coexpression data)

Top 50 enrichment test to 100820472 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**