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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100820833   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 tae-r.2   123123512   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 tae-r.2   123114023   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 tae-r.2   123105693   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 hvu-r.1   123453067   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 osa-u.5   4342622   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 zma-u.5   103648228   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 sbi-r.1   8063656   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 ath-u.5   CRR28   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101251285   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 bra-r.6   103862633   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 ppo-u.5   7461581   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 mtr-u.5   11408927   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 ghi-r.1   107948960   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 ghi-r.1   107899607   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 bna-r.1   106372068   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like 
 bna-r.1   106390399   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 sot-r.1   102592045   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 cit-r.1   102620736   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial 
 nta-r.1   107794828   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like 
 nta-r.1   107759601   pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like 

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Top 50 coexpressed genes to 100820833 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100820833 (bdi-r.1 coexpression data)

CoexMap"100820833"


bdiLOC100820833 | Entrez gene ID : 100820833      
Species bdi tae hvu osa zma sbi ath sly bra ppo mtr ghi bna sot cit nta cre vvi gma
Paralog 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (707 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003557441.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003557441.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003557441.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100820833
tae-r.2
for
123123512
tae-r.2
for
123114023
tae-r.2
for
123105693
hvu-r.1
for
123453067
osa-u.5
for
4342622
zma-u.5
for
103648228
sbi-r.1
for
8063656
ath-u.5
for
CRR28
sly-u.5
for
101251285
bra-r.6
for
103862633
ppo-u.5
for
7461581
mtr-u.5
for
11408927
ghi-r.1
for
107948960
ghi-r.1
for
107899607
bna-r.1
for
106372068
bna-r.1
for
106390399
sot-r.1
for
102592045
cit-r.1
for
102620736
nta-r.1
for
107794828
nta-r.1
for
107759601


Ortholog ID: 10525
Species bdi tae tae tae hvu osa zma sbi ath sly bra ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100820833 LOC123123512 LOC123114023 LOC123105693 LOC123453067 LOC4342622 LOC103648228 LOC8063656 CRR28 LOC101251285 LOC103862633 LOC7461581 LOC11408927 LOC107948960 LOC107899607 LOC106372068 LOC106390399 LOC102592045 LOC102620736 LOC107794828 LOC107759601
Function* pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100820833 123123512 123114023 123105693 123453067 4342622 103648228 8063656 842263 101251285 103862633 7461581 11408927 107948960 107899607 106372068 106390399 102592045 102620736 107794828 107759601
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