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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100821869   peptide chain release factor PrfB1, chloroplastic 
 tae-r.2   123188361   peptide chain release factor PrfB1, chloroplastic 
 tae-r.2   123052476   peptide chain release factor PrfB1, chloroplastic 
 tae-r.2   123044601   peptide chain release factor PrfB1, chloroplastic 
 hvu-r.1   123425782   peptide chain release factor PrfB1, chloroplastic 
 osa-u.5   4343528   peptide chain release factor PrfB1, chloroplastic 
 zma-u.5   100286295   peptide chain release factor 2 
 ath-u.5   HCF109   high chlorophyll fluorescent 109 
 gma-u.5   100775574   peptide chain release factor PrfB1, chloroplastic 
 sly-u.5   101257065   peptide chain release factor PrfB1, chloroplastic 
 bra-r.6   103868303   peptide chain release factor PrfB1, chloroplastic 
 vvi-u.5   100265078   peptide chain release factor PrfB1, chloroplastic 
 ppo-u.5   7462111   peptide chain release factor PrfB1, chloroplastic 
 mtr-u.5   11436720   peptide chain release factor PrfB1, chloroplastic 
 ghi-r.1   107928337   peptide chain release factor PrfB1, chloroplastic 
 ghi-r.1   107909110   peptide chain release factor PrfB1, chloroplastic 
 bna-r.1   125594268   peptide chain release factor PrfB1, chloroplastic-like 
 bna-r.1   106451543   peptide chain release factor PrfB1, chloroplastic 
 bna-r.1   106383079   peptide chain release factor PrfB1, chloroplastic 
 sot-r.1   102603194   peptide chain release factor PrfB1, chloroplastic 
 cit-r.1   102615234   peptide chain release factor PrfB1, chloroplastic 
 nta-r.1   107800112   peptide chain release factor PrfB1, chloroplastic 
 nta-r.1   107767663   peptide chain release factor PrfB1, chloroplastic 
 cre-r.1   CHLRE_01g010864v5   uncharacterized protein 

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Top 50 coexpressed genes to 100821869 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100821869 (bdi-r.1 coexpression data)

CoexMap"100821869"


bdiLOC100821869 | Entrez gene ID : 100821869      
Species bdi tae hvu osa zma ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre sbi
Paralog 1 3 1 1 1 1 1 1 1 1 1 1 2 3 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006415 [list] [network] translational termination  (17 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0016149 [list] [network] translation release factor activity, codon specific  (9 genes)  IEA  
Protein XP_003560113.3 [sequence] [blastp]
XP_014753313.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003560113.3)
cyto 6,  chlo 3  (predict for XP_014753313.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003560113.3)
other 8  (predict for XP_014753313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100821869
tae-r.2
for
123188361
tae-r.2
for
123052476
tae-r.2
for
123044601
hvu-r.1
for
123425782
osa-u.5
for
4343528
zma-u.5
for
100286295
ath-u.5
for
HCF109
gma-u.5
for
100775574
sly-u.5
for
101257065
bra-r.6
for
103868303
vvi-u.5
for
100265078
ppo-u.5
for
7462111
mtr-u.5
for
11436720
ghi-r.1
for
107928337
ghi-r.1
for
107909110
bna-r.1
for
125594268
bna-r.1
for
106451543
bna-r.1
for
106383079
sot-r.1
for
102603194
cit-r.1
for
102615234
nta-r.1
for
107800112
nta-r.1
for
107767663
cre-r.1
for
CHLRE_01g010864v5


Ortholog ID: 9700
Species bdi tae tae tae hvu osa zma ath gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100821869 LOC123188361 LOC123052476 LOC123044601 LOC123425782 LOC4343528 LOC100286295 HCF109 LOC100775574 LOC101257065 LOC103868303 LOC100265078 LOC7462111 LOC11436720 LOC107928337 LOC107909110 LOC125594268 LOC106451543 LOC106383079 LOC102603194 LOC102615234 LOC107800112 LOC107767663 CHLRE_01g010864v5
Function* peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor 2 high chlorophyll fluorescent 109 peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic-like peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic peptide chain release factor PrfB1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae03040 Spliceosome 2
tae04141 Protein processing in endoplasmic reticulum 2
tae04144 Endocytosis 2
tae03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00860 Porphyrin metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 2
nta03018 RNA degradation 2
nta03410 Base excision repair 2
nta04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 3
cre03060 Protein export 2
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100821869 123188361 123052476 123044601 123425782 4343528 100286295 833614 100775574 101257065 103868303 100265078 7462111 11436720 107928337 107909110 125594268 106451543 106383079 102603194 102615234 107800112 107767663 5715017
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