ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100821973	lichenase-2
bdi-r.1	112270530	lichenase-2-like
tae-r.2	123063422	glucan endo-1,3-beta-glucosidase GII
tae-r.2	123168812	lichenase-2-like
tae-r.2	123059356	glucan endo-1,3-beta-glucosidase GII
hvu-r.1	123440912	glucan endo-1,3-beta-glucosidase, acidic isoform-like
hvu-r.1	123440916	glucan endo-1,3-beta-glucosidase GII-like
hvu-r.1	123445446	glucan endo-1,3-beta-glucosidase GIII-like
osa-u.5	4325938	glucan endo-1,3-beta-glucosidase GII
zma-u.5	103635503	lichenase-2
zma-u.5	103654866	glucan endo-1,3-beta-glucosidase, acidic isoform-like
zma-u.5	100037765	glucan endo-1,3-beta-glucosidase homolog 1
sbi-r.1	8062297	glucan endo-1,3-beta-glucosidase, acidic isoform
sbi-r.1	110430279	lichenase-2-like
sbi-r.1	8062299	lichenase-2
ath-u.5	BG3	beta-1,3-glucanase 3
ath-u.5	AT4G16260	Glycosyl hydrolase superfamily protein
gma-u.5	100795474	glucan endo-1,3-beta-glucosidase
sly-u.5	543764	glucan endo-1,3-beta-glucosidase, acidic
sly-u.5	101261650	glucan endo-1,3-beta-glucosidase B
bra-r.6	103842320	glucan endo-1,3-beta-glucosidase, acidic isoform
bra-r.6	103869960	probable glucan endo-1,3-beta-glucosidase At4g16260
bra-r.6	103863058	glucan endo-1,3-beta-glucosidase-like
vvi-u.5	100260718	glucan endo-1,3-beta-glucosidase, basic isoform
vvi-u.5	100255644	glucan endo-1,3-beta-glucosidase, basic isoform
ppo-u.5	7485814	glucan endo-1,3-beta-glucosidase, basic vacuolar isoform-like
ppo-u.5	7478511	glucan endo-1,3-beta-glucosidase
ppo-u.5	7468989	glucan endo-1,3-beta-glucosidase, basic isoform
mtr-u.5	11445454	glucan endo-1,3-beta-glucosidase
ghi-r.1	107940712	glucan endo-1,3-beta-glucosidase, basic isoform-like
ghi-r.1	107959299	glucan endo-1,3-beta-glucosidase
ghi-r.1	107940715	glucan endo-1,3-beta-glucosidase, basic isoform
bna-r.1	106363311	probable glucan endo-1,3-beta-glucosidase At4g16260
bna-r.1	106412264	glucan endo-1,3-beta-glucosidase, acidic isoform-like
bna-r.1	106410962	probable glucan endo-1,3-beta-glucosidase BG3
sot-r.1	102579752	glucan endo-1,3-beta-glucosidase-like
sot-r.1	102580738	glucan endo-1,3-beta-glucosidase A-like
sot-r.1	102581231	glucan endo-1,3-beta-glucosidase, basic vacuolar isoform-like
cit-r.1	102613237	glucan endo-1,3-beta-glucosidase-like
cit-r.1	127899850	probable glucan endo-1,3-beta-glucosidase BG3
cit-r.1	102613523	glucan endo-1,3-beta-glucosidase, basic isoform-like
nta-r.1	107811575	glucan endo-1,3-beta-glucosidase, acidic-like
nta-r.1	107809780	lichenase-like

Top 50 coexpressed genes to 100821973 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100821973 (bdi-r.1 coexpression data)

CoexMap"100821973"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(658 genes)

IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(914 genes)

IEA

GO MF

GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds

(357 genes)

IEA

Protein

XP_010232967.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, chlo_mito 4, mito 2, vacu 2

(predict for XP_010232967.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_010232967.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100821973	bdi-r.1 for 112270530	tae-r.2 for 123063422	tae-r.2 for 123168812	tae-r.2 for 123059356	hvu-r.1 for 123440912	hvu-r.1 for 123440916	hvu-r.1 for 123445446	osa-u.5 for 4325938	zma-u.5 for 103635503	zma-u.5 for 103654866	zma-u.5 for 100037765	sbi-r.1 for 8062297	sbi-r.1 for 110430279	sbi-r.1 for 8062299	ath-u.5 for BG3	ath-u.5 for AT4G16260	gma-u.5 for 100795474	sly-u.5 for 543764	sly-u.5 for 101261650	bra-r.6 for 103842320	bra-r.6 for 103869960	bra-r.6 for 103863058	vvi-u.5 for 100260718	vvi-u.5 for 100255644	ppo-u.5 for 7485814	ppo-u.5 for 7478511	ppo-u.5 for 7468989	mtr-u.5 for 11445454	ghi-r.1 for 107940712	ghi-r.1 for 107959299	ghi-r.1 for 107940715	bna-r.1 for 106363311	bna-r.1 for 106412264	bna-r.1 for 106410962	sot-r.1 for 102579752	sot-r.1 for 102580738	sot-r.1 for 102581231	cit-r.1 for 102613237	cit-r.1 for 127899850	cit-r.1 for 102613523	nta-r.1 for 107811575	nta-r.1 for 107809780

Ortholog

Ortholog ID: 135

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

Symbol

BG3

BGL2

Q`a

GLUB2

Function^*

lichenase-2

lichenase-2-like

lichenase-2

glucan endo-1,3-beta-glucosidase GII

glucan endo-1,3-beta-glucosidase, acidic isoform-like

glucan endo-1,3-beta-glucosidase GII-like

lichenase-2-like

glucan endo-1,3-beta-glucosidase GII

glucan endo-1,3-beta-glucosidase, acidic isoform

lichenase-2

uncharacterized LOC100283978

glucan endo-1,3-beta-glucosidase GII

lichenase-2-like

lichenase-2

glucan endo-1,3-beta-glucosidase GII

beta-1,3-glucanase 3

beta-1,3-glucanase 2

glucan endo-1,3-beta-glucosidase

glucan endo-1,3-beta-glucosidase, acidic

glucan endo-1,3-beta-glucosidase B

glucan endo-1,3-beta-D-glucosidase

glucan endo-1,3-beta-glucosidase, acidic isoform

probable glucan endo-1,3-beta-glucosidase At4g16260

glucan endo-1,3-beta-glucosidase-like

glucan endo-1,3-beta-glucosidase, basic isoform

class I beta-1,3-glucanase

glucan endo-1,3-beta-glucosidase

glucan endo-1,3-beta-glucosidase, basic vacuolar isoform-like

glucan endo-1,3-beta-glucosidase, basic isoform

glucan endo-1,3-beta-glucosidase

glucan endo-1,3-beta-glucosidase, acidic

glucan endo-1,3-beta-glucosidase, acidic isoform-like

probable glucan endo-1,3-beta-glucosidase BG3

glucan endo-1,3-beta-glucosidase, acidic isoform-like

glucan endo-1,3-beta-glucosidase A-like

glucan endo-1,3-beta-glucosidase A

1,3-beta-D-glucan glucanohydrolase; endo-1,3-beta-D-glucanase; 1,3-beta-glucanase (basic, class I)

glucan endo-1,3-beta-glucosidase, basic isoform-like

glucan endo-1,3-beta-glucosidase-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	5
tae04075	Plant hormone signal transduction	5
tae04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	3
osa04626	Plant-pathogen interaction	3
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	4
osa04075	Plant hormone signal transduction	2
osa04626	Plant-pathogen interaction	2
osa00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	2
sbi01200	Carbon metabolism	2
sbi00052	Galactose metabolism	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	3
sbi04075	Plant hormone signal transduction	3
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	7
sly04075	Plant hormone signal transduction	4
sly00520	Amino sugar and nucleotide sugar metabolism	4
sly00940	Phenylpropanoid biosynthesis	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	5
sly00520	Amino sugar and nucleotide sugar metabolism	3
sly04075	Plant hormone signal transduction	3
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3
vvi00561	Glycerolipid metabolism	2
vvi00564	Glycerophospholipid metabolism	2
vvi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00460	Cyanoamino acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	2
mtr00940	Phenylpropanoid biosynthesis	2
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2
mtr00940	Phenylpropanoid biosynthesis	2
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00904	Diterpenoid biosynthesis	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	3
ghi00904	Diterpenoid biosynthesis	2
ghi00940	Phenylpropanoid biosynthesis	2
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	3
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	8
sot04075	Plant hormone signal transduction	8
sot04626	Plant-pathogen interaction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3

Expression

Expression pattern

Entrez Gene ID^*

100822536

123147264

123181826

123075597

123440912

123440916

123440143

4325938

4326519

4326518

103635503

100283978

103636298

110430279

8076820

8074293

824891

824893

100795474

100801599

543764

101261650

544091

103842320

103869960

103863058

100260718

100232986

100233076

7485814

11412497

11416839

11440651

107959299

107889424

107889425

106408037

106353239

111198011

102580738

102589208

102577444

102613523

102614791

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Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	3	1	3	3	2	1	2	3	2	3	1	3	3	3	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100821973 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100821973 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**