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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100823454   reticulon-like protein B9 
 bdi-r.1   100844995   reticulon-like protein B2 
 bdi-r.1   100844372   reticulon-like protein B1 
 bdi-r.1   100842730   reticulon-like protein B1 
 tae-r.2   123076978   reticulon-like protein B9 
 tae-r.2   123147857   reticulon-like protein B2 
 tae-r.2   123077848   reticulon-like protein B1 
 hvu-r.1   123448944   reticulon-like protein B1 
 hvu-r.1   123452528   reticulon-like protein B8 
 osa-u.5   4342374   reticulon-like protein B8 
 zma-u.5   100283096   seed maturation protein 
 zma-u.5   100283279   dehydrin6 
 zma-u.5   100284105   seed maturation protein 
 sbi-r.1   8085376   reticulon-like protein B2 
 sbi-r.1   110434999   reticulon-like protein B2 
 sbi-r.1   110433922   reticulon-like protein B1 
 ath-u.5   AT2G46170   Reticulon family protein 
 ath-u.5   AT1G68230   Reticulon family protein 
 ath-u.5   RTNLB3   Reticulan like protein B3 
 gma-u.5   100306402   uncharacterized LOC100306402 
 gma-u.5   100796111   reticulon-like protein B5-like 
 gma-u.5   100809028   reticulon-like protein B9 
 sly-u.5   101259405   reticulon-like protein B8 
 sly-u.5   101260015   reticulon-like protein B2 
 bra-r.6   103834960   reticulon-like protein B1 
 bra-r.6   103861418   reticulon-like protein B1 
 bra-r.6   103836883   reticulon-like protein B7 
 vvi-u.5   100267805   reticulon-like protein B8 
 vvi-u.5   100267262   reticulon-like protein B2 
 ppo-u.5   7457367   reticulon-like protein B5 
 ppo-u.5   7453887   reticulon-like protein B9 
 mtr-u.5   120577351   reticulon-like protein B9 
 mtr-u.5   25485481   reticulon-like protein B14 
 mtr-u.5   25490560   reticulon-like protein B8 
 ghi-r.1   107947066   reticulon-like protein B3 
 ghi-r.1   107947675   reticulon-like protein B3 
 bna-r.1   125574992   reticulon-like protein B8 
 bna-r.1   125577082   reticulon-like protein B1 
 sot-r.1   102579160   reticulon-like protein B2 
 sot-r.1   102582810   reticulon-like protein B9 
 cit-r.1   102626033   reticulon-like protein B8 
 cit-r.1   102625122   reticulon-like protein B5 
 cit-r.1   102620513   reticulon-like protein B3 
 nta-r.1   107799175   reticulon-like protein B5 
 nta-r.1   107767738   reticulon-like protein B5 
 nta-r.1   107782454   reticulon-like protein B4 
 cre-r.1   CHLRE_16g689087v5   uncharacterized protein 
 cre-r.1   CHLRE_06g308950v5   uncharacterized protein 

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Top 50 coexpressed genes to 100823454 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100823454 (bdi-r.1 coexpression data)

CoexMap"100823454"


bdiLOC100823454 | Entrez gene ID : 100823454      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 2 1 3 3 3 3 2 3 2 2 3 2 2 2 3 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_003565957.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_003565957.1)
Subcellular
localization
TargetP
chlo 7,  other 7  (predict for XP_003565957.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100823454
bdi-r.1
for
100844995
bdi-r.1
for
100844372
bdi-r.1
for
100842730
tae-r.2
for
123076978
tae-r.2
for
123147857
tae-r.2
for
123077848
hvu-r.1
for
123448944
hvu-r.1
for
123452528
osa-u.5
for
4342374
zma-u.5
for
100283096
zma-u.5
for
100283279
zma-u.5
for
100284105
sbi-r.1
for
8085376
sbi-r.1
for
110434999
sbi-r.1
for
110433922
ath-u.5
for
AT2G46170
ath-u.5
for
AT1G68230
ath-u.5
for
RTNLB3
gma-u.5
for
100306402
gma-u.5
for
100796111
gma-u.5
for
100809028
sly-u.5
for
101259405
sly-u.5
for
101260015
bra-r.6
for
103834960
bra-r.6
for
103861418
bra-r.6
for
103836883
vvi-u.5
for
100267805
vvi-u.5
for
100267262
ppo-u.5
for
7457367
ppo-u.5
for
7453887
mtr-u.5
for
120577351
mtr-u.5
for
25485481
mtr-u.5
for
25490560
ghi-r.1
for
107947066
ghi-r.1
for
107947675
bna-r.1
for
125574992
bna-r.1
for
125577082
sot-r.1
for
102579160
sot-r.1
for
102582810
cit-r.1
for
102626033
cit-r.1
for
102625122
cit-r.1
for
102620513
nta-r.1
for
107799175
nta-r.1
for
107767738
nta-r.1
for
107782454
cre-r.1
for
CHLRE_16g689087v5
cre-r.1
for
CHLRE_06g308950v5


Ortholog ID: 116
Species bdi bdi bdi tae tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi ath ath gma gma gma sly sly sly bra bra bra vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta cre cre
Symbol LOC100844372 LOC100837161 LOC100846402 LOC123060769 LOC123161103 LOC123141132 LOC123448944 LOC123443230 LOC123407639 LOC4342374 LOC4325472 LOC4326742 LOC100282693 LOC100217189 LOC100191576 LOC110433851 LOC8074554 AT2G46170 BTI1 LOC100779788 LOC100787981 LOC100793862 LOC101259083 LOC101258243 LOC101262660 LOC103838233 LOC103870479 LOC103847698 LOC100267805 LOC7457367 LOC18105638 LOC7472736 LOC120577351 LOC11436594 LOC107896832 LOC107890693 LOC107914521 LOC106450700 LOC106366486 LOC106450701 LOC102582810 LOC102601510 LOC102606390 LOC102625122 LOC102620513 LOC102609187 LOC107768346 LOC107827488 CHLRE_16g689087v5 CHLRE_06g308950v5
Function* reticulon-like protein B1 reticulon-like protein B4 reticulon-like protein B1 reticulon-like protein B1 reticulon-like protein B2 reticulon-like protein B1 reticulon-like protein B1 reticulon-like protein B1 reticulon-like protein B1 reticulon-like protein B8 reticulon-like protein B9 reticulon-like protein B1 uncharacterized LOC100282693 seed maturation protein Seed maturation protein reticulon-like protein B1 reticulon-like protein B9 Reticulon family protein VIRB2-interacting protein 1 reticulon-like protein B5 reticulon-like protein B8-like reticulon-like protein B5-like reticulon-like protein B1 reticulon-like protein B9 reticulon-like protein B1 reticulon-like protein B3 reticulon-like protein B8 reticulon-like protein B8 reticulon-like protein B8 reticulon-like protein B5 reticulon-like protein B1 reticulon-like protein B2 reticulon-like protein B9 reticulon-like protein B8 reticulon-like protein B8 reticulon-like protein B3 reticulon-like protein B8 reticulon-like protein B5 reticulon-like protein B3 reticulon-like protein B5 reticulon-like protein B9 reticulon-like protein B8 reticulon-like protein B1 reticulon-like protein B5 reticulon-like protein B3 reticulon-like protein B2 reticulon-like protein B8 reticulon-like protein B5 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae04814 Motor proteins 5
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 3
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 3
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa00061 Fatty acid biosynthesis 2
osa00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00270 Cysteine and methionine metabolism 4
gma01200 Carbon metabolism 4
gma00260 Glycine, serine and threonine metabolism 3
gma00750 Vitamin B6 metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bra01230 Biosynthesis of amino acids 5
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo03050 Proteasome 3
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna00330 Arginine and proline metabolism 2
bna00410 beta-Alanine metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 2
bna00410 beta-Alanine metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 8
sot04142 Lysosome 8
sot04145 Phagosome 7
sot00561 Glycerolipid metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot04141 Protein processing in endoplasmic reticulum 4
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit00052 Galactose metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04814 Motor proteins 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
cit03022 Basal transcription factors 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 6
nta04145 Phagosome 6
nta04517 IgSF CAM signaling 6
nta04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
cre00030 Pentose phosphate pathway 2
cre00051 Fructose and mannose metabolism 2
cre00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100844372 100837161 100846402 123060769 123161103 123141132 123448944 123443230 123407639 4342374 4325472 4326742 100282693 100217189 100191576 110433851 8074554 819224 828463 100779788 100787981 100793862 101259083 101258243 101262660 103838233 103870479 103847698 100267805 7457367 18105638 7472736 120577351 11436594 107896832 107890693 107914521 106450700 106366486 106450701 102582810 102601510 102606390 102625122 102620513 102609187 107768346 107827488 5724461 66053917
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