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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824252   neurofilament medium polypeptide 
 tae-r.2   123095761   histone H3.v1 
 tae-r.2   123090746   histone H3.v1 
 tae-r.2   123086334   histone H3.v1 
 hvu-r.1   123447245   histone H3.v1 
 osa-u.5   4338129   uncharacterized LOC4338129 
 zma-u.5   103643837   histone H3.v1 
 sbi-r.1   8062963   histone H3.v1 
 ath-u.5   AT3G47850   tRNA (Ile)-lysidine synthase 
 gma-u.5   100794844   uncharacterized LOC100794844 
 gma-u.5   100777249   uncharacterized LOC100777249 
 sly-u.5   101247228   uncharacterized LOC101247228 
 bra-r.6   103873193   uncharacterized LOC103873193 
 vvi-u.5   100258784   hypothetical protein 
 ppo-u.5   7483456   B3 domain-containing protein Os02g0598200 
 mtr-u.5   25480532   uncharacterized LOC25480532 
 ghi-r.1   107918369   uncharacterized LOC107918369 
 ghi-r.1   107893576   uncharacterized LOC107893576 
 bna-r.1   106407406   uncharacterized LOC106407406 
 bna-r.1   106347592   uncharacterized LOC106347592 
 sot-r.1   102593701   uncharacterized LOC102593701 
 cit-r.1   102623830   uncharacterized LOC102623830 
 nta-r.1   107773413   uncharacterized LOC107773413 
 nta-r.1   107770596   uncharacterized LOC107770596 

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Top 50 coexpressed genes to 100824252 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824252 (bdi-r.1 coexpression data)

CoexMap"100824252"


bdiLOC100824252 | Entrez gene ID : 100824252      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (552 genes)  IEA  
GO MF
Protein XP_010231335.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for XP_010231335.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_010231335.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824252
tae-r.2
for
123095761
tae-r.2
for
123090746
tae-r.2
for
123086334
hvu-r.1
for
123447245
osa-u.5
for
4338129
zma-u.5
for
103643837
sbi-r.1
for
8062963
ath-u.5
for
AT3G47850
gma-u.5
for
100794844
gma-u.5
for
100777249
sly-u.5
for
101247228
bra-r.6
for
103873193
vvi-u.5
for
100258784
ppo-u.5
for
7483456
mtr-u.5
for
25480532
ghi-r.1
for
107918369
ghi-r.1
for
107893576
bna-r.1
for
106407406
bna-r.1
for
106347592
sot-r.1
for
102593701
cit-r.1
for
102623830
nta-r.1
for
107773413
nta-r.1
for
107770596


Ortholog ID: 9523
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100824252 LOC123095761 LOC123090746 LOC123070400 LOC123447245 LOC4338129 LOC103643837 LOC8062963 AT3G47850 LOC100794844 LOC100777249 LOC101247228 LOC103873193 LOC100258784 LOC7483456 LOC25480532 LOC107918369 LOC107893576 LOC106407406 LOC106347592 LOC102593701 LOC102623830 LOC107773413 LOC107770596
Function* neurofilament medium polypeptide histone H3.v1 histone H3.v1 cyclic nucleotide-gated cation channel beta-1 histone H3.v1 uncharacterized LOC4338129 histone H3.v1 histone H3.v1 tRNA (Ile)-lysidine synthase uncharacterized LOC100794844 uncharacterized LOC100777249 uncharacterized LOC101247228 uncharacterized LOC103873193 hypothetical protein B3 domain-containing protein Os02g0598200 uncharacterized LOC25480532 uncharacterized LOC107918369 uncharacterized LOC107893576 uncharacterized LOC106407406 uncharacterized LOC106347592 uncharacterized LOC102593701 uncharacterized LOC102623830 uncharacterized LOC107773413 uncharacterized LOC107770596
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03015 mRNA surveillance pathway 3
gma04136 Autophagy - other 3
gma04382 Cornified envelope formation 3
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 3
bra00190 Oxidative phosphorylation 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824252 123095761 123090746 123070400 123447245 4338129 103643837 8062963 823941 100794844 100777249 101247228 103873193 100258784 7483456 25480532 107918369 107893576 106407406 106347592 102593701 102623830 107773413 107770596
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