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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824716   E3 ubiquitin-protein ligase RING1-like 
 osa-u.5   4339830   E3 ubiquitin-protein ligase RING1-like 
 osa-u.5   4348952   E3 ubiquitin-protein ligase RING1-like 
 zma-u.5   103638198   E3 ubiquitin-protein ligase RING1-like 
 zma-u.5   100192058   putative RING zinc finger domain superfamily protein 
 zma-u.5   100285755   uncharacterized LOC100285755 
 ath-u.5   AT3G19950   RING/U-box superfamily protein 
 gma-u.5   100818686   E3 ubiquitin-protein ligase RING1-like 
 gma-u.5   100797586   E3 ubiquitin-protein ligase RING1 
 gma-u.5   100784504   E3 ubiquitin-protein ligase RING1-like 
 sly-u.5   101264918   E3 ubiquitin-protein ligase RING1-like 
 sly-u.5   101259135   E3 ubiquitin-protein ligase RING1-like 
 vvi-u.5   100244372   E3 ubiquitin-protein ligase RING1 
 ppo-u.5   7454037   E3 ubiquitin-protein ligase RING1 
 ppo-u.5   7456300   E3 ubiquitin-protein ligase RING1-like 
 mtr-u.5   11408990   E3 ubiquitin-protein ligase RING1-like 
 mtr-u.5   11424671   E3 ubiquitin-protein ligase RING1 

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Top 50 coexpressed genes to 100824716 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824716 (bdi-r.1 coexpression data)

CoexMap"100824716"


bdiLOC100824716 | Entrez gene ID : 100824716      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 2 3 1 3 2 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (411 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (193 genes)  IEA  
Protein XP_003574092.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  chlo_mito 3  (predict for XP_003574092.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_003574092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824716
osa-u.5
for
4339830
osa-u.5
for
4348952
zma-u.5
for
103638198
zma-u.5
for
100192058
zma-u.5
for
100285755
ath-u.5
for
AT3G19950
gma-u.5
for
100818686
gma-u.5
for
100797586
gma-u.5
for
100784504
sly-u.5
for
101264918
sly-u.5
for
101259135
vvi-u.5
for
100244372
ppo-u.5
for
7454037
ppo-u.5
for
7456300
mtr-u.5
for
11408990
mtr-u.5
for
11424671


Ortholog ID: 2728
Species bdi bdi tae tae hvu hvu osa osa zma zma sbi sbi ath gma gma sly sly bra bra vvi ppo mtr mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC100824716 LOC100827302 LOC123088667 LOC123151133 LOC123432010 LOC123411596 LOC4348952 LOC4339830 LOC100192058 LOC100285755 LOC8066855 LOC8067387 AT3G19950 LOC100784504 LOC100785289 LOC101264918 LOC101259135 LOC103859830 LOC103836798 LOC100244372 LOC18105626 LOC11408990 LOC11424671 LOC107886885 LOC107894053 LOC106346265 LOC125599268 LOC102592279 LOC102600171 LOC102608499 LOC142177560 LOC107818536
Function* E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like putative RING zinc finger domain superfamily protein uncharacterized LOC100285755 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like RING/U-box superfamily protein E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RING1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 2
tae00410 beta-Alanine metabolism 2
tae00592 alpha-Linolenic acid metabolism 2
tae00640 Propanoate metabolism 2
tae01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae03272 Virion - Hepatitis viruses 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 7
sot03060 Protein export 3
sot04145 Phagosome 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824716 100827302 123088667 123151133 123432010 123411596 4348952 4339830 100192058 100285755 8066855 8067387 821533 100784504 100785289 101264918 101259135 103859830 103836798 100244372 18105626 11408990 11424671 107886885 107894053 106346265 125599268 102592279 102600171 102608499 142177560 107818536
The preparation time of this page was 1.6 [sec].