ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100827380	WD repeat-containing protein 44
bdi-r.1	100844520	WD repeat-containing protein 44
bdi-r.1	100825146	WD repeat-containing protein 44
bdi-r.1	100825540	WD repeat-containing protein 44
tae-r.2	123047412	WD repeat-containing protein 44
tae-r.2	123099072	uncharacterized LOC123099072
hvu-r.1	123449932	uncharacterized LOC123449932
hvu-r.1	123428340	WD repeat-containing protein 44-like
osa-u.5	9269146	uncharacterized LOC9269146
osa-u.5	4336699	uncharacterized LOC4336699
zma-u.5	100275689	uncharacterized LOC100275689
zma-u.5	100281552	uncharacterized LOC100281552
zma-u.5	100501308	WD repeat-containing protein 44
sbi-r.1	8073010	2-deoxy-glucose resistant protein 2
sbi-r.1	8082869	WD repeat-containing protein 44
ath-u.5	AT2G37670	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G64610	Transducin/WD40 repeat-like superfamily protein
ath-u.5	AT1G48870	Transducin/WD40 repeat-like superfamily protein
gma-u.5	100782200	WD repeat-containing protein 44
gma-u.5	100780979	periodic tryptophan protein 2 homolog
sly-u.5	101256031	uncharacterized LOC101256031
sly-u.5	101260733	uncharacterized WD repeat-containing protein C18H10.05
sly-u.5	101249662	uncharacterized LOC101249662
bra-r.6	103838192	WD repeat-containing protein 44
bra-r.6	103844825	WD repeat-containing protein 44
bra-r.6	103844882	WD repeat-containing protein 44
vvi-u.5	100249640	uncharacterized LOC100249640
vvi-u.5	100264924	uncharacterized LOC100264924
vvi-u.5	100241604	WD repeat-containing protein YMR102C
ppo-u.5	7462346	uncharacterized LOC7462346
ppo-u.5	7464287	uncharacterized LOC7464287
mtr-u.5	25487371	WD repeat-containing protein 44
mtr-u.5	11435030	2-deoxy-glucose resistant protein 2
mtr-u.5	11408556	uncharacterized LOC11408556
ghi-r.1	107924375	WD repeat-containing protein 44
ghi-r.1	107929490	uncharacterized WD repeat-containing protein C18H10.05
ghi-r.1	107924161	WD repeat-containing protein 44
bna-r.1	125576587	uncharacterized LOC125576587
bna-r.1	111200919	WD repeat-containing protein 44-like
sot-r.1	102585613	U4/U6 small nuclear ribonucleoprotein Prp4
sot-r.1	102593255	WD repeat-containing protein YMR102C
sot-r.1	102593966	WD repeat-containing protein 44-like
cit-r.1	102606796	uncharacterized LOC102606796
cit-r.1	102609724	uncharacterized LOC102609724
cit-r.1	102612372	uncharacterized LOC102612372
nta-r.1	107791348	uncharacterized LOC107791348
nta-r.1	107787387	uncharacterized LOC107787387
nta-r.1	107784931	uncharacterized LOC107784931
cre-r.1	CHLRE_06g276100v5	uncharacterized protein

Top 50 coexpressed genes to 100827380 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100827380 (bdi-r.1 coexpression data)

CoexMap"100827380"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4040 genes)

IEA

Protein

XP_003569955.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_003569955.1)

Subcellular
localization
TargetP

other 9

(predict for XP_003569955.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100827380	bdi-r.1 for 100844520	bdi-r.1 for 100825146	bdi-r.1 for 100825540	tae-r.2 for 123047412	tae-r.2 for 123099072	hvu-r.1 for 123449932	hvu-r.1 for 123428340	osa-u.5 for 9269146	osa-u.5 for 4336699	zma-u.5 for 100275689	zma-u.5 for 100281552	zma-u.5 for 100501308	sbi-r.1 for 8073010	sbi-r.1 for 8082869	ath-u.5 for AT2G37670	ath-u.5 for AT1G64610	ath-u.5 for AT1G48870	gma-u.5 for 100782200	gma-u.5 for 100780979	sly-u.5 for 101256031	sly-u.5 for 101260733	sly-u.5 for 101249662	bra-r.6 for 103838192	bra-r.6 for 103844825	bra-r.6 for 103844882	vvi-u.5 for 100249640	vvi-u.5 for 100264924	vvi-u.5 for 100241604	ppo-u.5 for 7462346	ppo-u.5 for 7464287	mtr-u.5 for 25487371	mtr-u.5 for 11435030	mtr-u.5 for 11408556	ghi-r.1 for 107924375	ghi-r.1 for 107929490	ghi-r.1 for 107924161	bna-r.1 for 125576587	bna-r.1 for 111200919	sot-r.1 for 102585613	sot-r.1 for 102593255	sot-r.1 for 102593966	cit-r.1 for 102606796	cit-r.1 for 102609724	cit-r.1 for 102612372	nta-r.1 for 107791348	nta-r.1 for 107787387	nta-r.1 for 107784931	cre-r.1 for CHLRE_06g276100v5

Ortholog

Ortholog ID: 182

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

WD repeat-containing protein 44

uncharacterized LOC100842788

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC123449932

uncharacterized WD repeat-containing protein sll0163-like

WD repeat-containing protein 44-like

uncharacterized LOC4336699

uncharacterized LOC4337413

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

2-deoxy-glucose resistant protein 2

WD repeat-containing protein 44

Transducin/WD40 repeat-like superfamily protein

WD repeat-containing protein 44

WD repeat-containing protein YMR102C

WD repeat-containing protein 44

uncharacterized LOC101256031

uncharacterized LOC101249662

uncharacterized LOC101245001

WD repeat-containing protein 44

uncharacterized LOC103850247

WD repeat-containing protein 44

uncharacterized LOC100249640

WD repeat-containing protein YMR102C

vegetative incompatibility protein HET-E-1

uncharacterized LOC7497506

uncharacterized LOC7497266

WD repeat-containing protein 44

2-deoxy-glucose resistant protein 2

uncharacterized WD repeat-containing protein alr3466

WD repeat-containing protein 44

U4/U6 small nuclear ribonucleoprotein Prp4

WD repeat-containing protein 44

uncharacterized LOC102609724

uncharacterized LOC102614368

WD repeat-containing protein YMR102C-like

uncharacterized LOC107823380

WD repeat-containing protein YMR102C

uncharacterized LOC107766553

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3
tae03015	mRNA surveillance pathway	2
tae04382	Cornified envelope formation	2
tae04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	6
tae04626	Plant-pathogen interaction	6
tae00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04712	Circadian rhythm - plant	4
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	3
osa00566	Sulfoquinovose metabolism	3
osa00564	Glycerophospholipid metabolism	2
osa00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00061	Fatty acid biosynthesis	4
zma01212	Fatty acid metabolism	4
zma00900	Terpenoid backbone biosynthesis	3
zma00620	Pyruvate metabolism	2
zma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi04145	Phagosome	2
sbi03250	Viral life cycle - HIV-1	2
sbi03272	Virion - Hepatitis viruses	2
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	4
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04016	MAPK signaling pathway - plant	4
bra02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	5
bna04626	Plant-pathogen interaction	5
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2
bna04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00920	Sulfur metabolism	2
nta00790	Folate biosynthesis	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00280	Valine, leucine and isoleucine degradation	2

Expression

Expression pattern

Entrez Gene ID^*

100825146

100828955

100842788

123191051

123190040

123127830

123449932

123426697

123399755

4336699

4337413

103641627

103641868

8073010

8057600

842769

831780

820786

100817209

100801576

100807177

101256031

101249662

101245001

103844882

103850247

103865619

100249640

100241604

100245187

7467055

7497506

7497266

25487371

11435030

25502243

107920400

107904514

121215517

106366726

106387484

102585613

102595963

102583402

102609724

102614368

102618704

107823380

107770909

107766553

5721740

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	2	2	2	3	2	3	2	3	3	3	2	3	3	2	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100827380 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100827380 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**