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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827422   cleavage and polyadenylation specificity factor subunit 3-II 
 tae-r.2   123121465   cleavage and polyadenylation specificity factor subunit 3-II 
 tae-r.2   123103687   cleavage and polyadenylation specificity factor subunit 3-II 
 hvu-r.1   123398211   cleavage and polyadenylation specificity factor subunit 3-II 
 osa-u.5   4346985   cleavage and polyadenylation specificity factor subunit 3-II 
 zma-u.5   103651494   cleavage and polyadenylation specificity factor subunit 3-II 
 sbi-r.1   8054389   cleavage and polyadenylation specificity factor subunit 3-II 
 ath-u.5   CPSF73-II   cleavage and polyadenylation specificity factor 73 kDa subunit-II 
 gma-u.5   100814997   cleavage and polyadenylation specificity factor subunit 3-II 
 sly-u.5   101259627   cleavage and polyadenylation specificity factor subunit 3-II 
 bra-r.6   103854045   cleavage and polyadenylation specificity factor subunit 3-II 
 vvi-u.5   100261060   cleavage and polyadenylation specificity factor subunit 3-II 
 ppo-u.5   7459752   cleavage and polyadenylation specificity factor subunit 3-II 
 mtr-u.5   25482553   cleavage and polyadenylation specificity factor subunit 3-II 
 ghi-r.1   121228303   cleavage and polyadenylation specificity factor subunit 3-II 
 ghi-r.1   107911563   cleavage and polyadenylation specificity factor subunit 3-II 
 sot-r.1   102578906   cleavage and polyadenylation specificity factor subunit 3-II 
 cit-r.1   102625782   cleavage and polyadenylation specificity factor subunit 3-II 
 nta-r.1   107801389   cleavage and polyadenylation specificity factor subunit 3-II 
 nta-r.1   107769852   cleavage and polyadenylation specificity factor subunit 3-II-like 
 cre-r.1   CHLRE_02g080100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100827422 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827422 (bdi-r.1 coexpression data)

CoexMap"100827422"


bdiLOC100827422 | Entrez gene ID : 100827422      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi sot cit nta cre bna
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016180 [list] [network] snRNA processing  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_003578085.1 [sequence] [blastp]
XP_010238147.1 [sequence] [blastp]
XP_010238149.1 [sequence] [blastp]
XP_024310963.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 3,  chlo 1,  nucl 1,  vacu 1,  golg 1  (predict for XP_003578085.1)
cyto 4,  cysk 4,  chlo 1,  vacu 1,  golg 1  (predict for XP_010238147.1)
cyto 4,  cysk 4,  chlo 1,  vacu 1,  golg 1  (predict for XP_010238149.1)
cyto 4,  cysk 4,  chlo 1,  vacu 1,  golg 1  (predict for XP_024310963.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003578085.1)
other 7  (predict for XP_010238147.1)
other 7  (predict for XP_010238149.1)
other 7  (predict for XP_024310963.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827422
tae-r.2
for
123121465
tae-r.2
for
123103687
hvu-r.1
for
123398211
osa-u.5
for
4346985
zma-u.5
for
103651494
sbi-r.1
for
8054389
ath-u.5
for
CPSF73-II
gma-u.5
for
100814997
sly-u.5
for
101259627
bra-r.6
for
103854045
vvi-u.5
for
100261060
ppo-u.5
for
7459752
mtr-u.5
for
25482553
ghi-r.1
for
121228303
ghi-r.1
for
107911563
sot-r.1
for
102578906
cit-r.1
for
102625782
nta-r.1
for
107801389
nta-r.1
for
107769852
cre-r.1
for
CHLRE_02g080100v5


Ortholog ID: 10643
Species bdi tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi sot cit nta nta cre
Symbol LOC100827422 LOC123121465 LOC123103687 LOC123398211 LOC4346985 LOC103651494 LOC8054389 CPSF73-II LOC100814997 LOC101259627 LOC103854045 LOC100261060 LOC7459752 LOC25482553 LOC121228303 LOC107911563 LOC102578906 LOC102625782 LOC107801389 LOC107769852 CHLRE_02g080100v5
Function* cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor 73 kDa subunit-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II cleavage and polyadenylation specificity factor subunit 3-II-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 2
tae00770 Pantothenate and CoA biosynthesis 2
tae01210 2-Oxocarboxylic acid metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00970 Aminoacyl-tRNA biosynthesis 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827422 123121465 123103687 123398211 4346985 103651494 8054389 814702 100814997 101259627 103854045 100261060 7459752 25482553 121228303 107911563 102578906 102625782 107801389 107769852 5727286
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