ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100828469	TBCC domain-containing protein 1
bdi-r.1	100837269	TBCC domain-containing protein 1
tae-r.2	123132646	TBCC domain-containing protein 1
tae-r.2	123144223	TBCC domain-containing protein 1
tae-r.2	123136740	TBCC domain-containing protein 1
hvu-r.1	123408466	TBCC domain-containing protein 1-like
hvu-r.1	123401787	TBCC domain-containing protein 1-like
osa-u.5	4328604	uncharacterized LOC4328604
zma-u.5	100277826	Tubulin binding cofactor C domain-containing protein
zma-u.5	100275773	uncharacterized LOC100275773
zma-u.5	100382067	Tubulin binding cofactor C domain-containing protein
sbi-r.1	110431264	TBCC domain-containing protein 1-like
sbi-r.1	8071628	TBCC domain-containing protein 1
ath-u.5	AT2G42230	C-CAP/cofactor C-like domain-containing protein
ath-u.5	AT3G57890	Tubulin binding cofactor C domain-containing protein
gma-u.5	100819271	TBCC domain-containing protein 1
gma-u.5	100801317	TBCC domain-containing protein 1
gma-u.5	100800780	TBCC domain-containing protein 1
sly-u.5	101261178	uncharacterized LOC101261178
bra-r.6	103841690	receptor protein kinase-like protein ZAR1
bra-r.6	103863020	TBCC domain-containing protein 1
bra-r.6	103866618	TBCC domain-containing protein 1
vvi-u.5	100246888	uncharacterized LOC100246888
ppo-u.5	18099873	uncharacterized LOC18099873
ppo-u.5	7468946	uncharacterized LOC7468946
mtr-u.5	25483469	TBCC domain-containing protein 1
mtr-u.5	11441474	TBCC domain-containing protein 1
ghi-r.1	107899760	TBCC domain-containing protein 1
ghi-r.1	107922156	TBCC domain-containing protein 1
ghi-r.1	107922413	TBCC domain-containing protein 1
bna-r.1	125585021	TBCC domain-containing protein 1-like
bna-r.1	106450631	TBCC domain-containing protein 1
bna-r.1	106353220	TBCC domain-containing protein 1-like
sot-r.1	102594675	TBCC domain-containing protein 1
sot-r.1	102583029	TBCC domain-containing protein 1-like
cit-r.1	102608543	uncharacterized LOC102608543
nta-r.1	107809696	uncharacterized LOC107809696
nta-r.1	107819873	uncharacterized LOC107819873
nta-r.1	107792362	uncharacterized LOC107792362
cre-r.1	CHLRE_09g394880v5	uncharacterized protein

Top 50 coexpressed genes to 100828469 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100828469 (bdi-r.1 coexpression data)

CoexMap"100828469"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003563624.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, nucl 1

(predict for XP_003563624.1)

Subcellular
localization
TargetP

chlo 6

(predict for XP_003563624.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100828469	bdi-r.1 for 100837269	tae-r.2 for 123132646	tae-r.2 for 123144223	tae-r.2 for 123136740	hvu-r.1 for 123408466	hvu-r.1 for 123401787	osa-u.5 for 4328604	zma-u.5 for 100277826	zma-u.5 for 100275773	zma-u.5 for 100382067	sbi-r.1 for 110431264	sbi-r.1 for 8071628	ath-u.5 for AT2G42230	ath-u.5 for AT3G57890	gma-u.5 for 100819271	gma-u.5 for 100801317	gma-u.5 for 100800780	sly-u.5 for 101261178	bra-r.6 for 103841690	bra-r.6 for 103863020	bra-r.6 for 103866618	vvi-u.5 for 100246888	ppo-u.5 for 18099873	ppo-u.5 for 7468946	mtr-u.5 for 25483469	mtr-u.5 for 11441474	ghi-r.1 for 107899760	ghi-r.1 for 107922156	ghi-r.1 for 107922413	bna-r.1 for 125585021	bna-r.1 for 106450631	bna-r.1 for 106353220	sot-r.1 for 102594675	sot-r.1 for 102583029	cit-r.1 for 102608543	nta-r.1 for 107809696	nta-r.1 for 107819873	nta-r.1 for 107792362	cre-r.1 for CHLRE_09g394880v5

Ortholog

Ortholog ID: 2803

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

TBCC domain-containing protein 1

TBCC domain-containing protein 1-like

uncharacterized LOC4328604

Tubulin binding cofactor C domain-containing protein

uncharacterized LOC100275773

Tubulin binding cofactor C domain-containing protein

TBCC domain-containing protein 1-like

TBCC domain-containing protein 1

C-CAP/cofactor C-like domain-containing protein

Tubulin binding cofactor C domain-containing protein

TBCC domain-containing protein 1

uncharacterized LOC101261178

receptor protein kinase-like protein ZAR1

TBCC domain-containing protein 1

uncharacterized LOC100246888

uncharacterized LOC18099873

uncharacterized LOC7468946

TBCC domain-containing protein 1

TBCC domain-containing protein 1-like

TBCC domain-containing protein 1

TBCC domain-containing protein 1-like

uncharacterized LOC102608543

uncharacterized LOC107809696

uncharacterized LOC107819873

uncharacterized LOC107796192

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00020	Citrate cycle (TCA cycle)	4
tae01200	Carbon metabolism	4
tae01210	2-Oxocarboxylic acid metabolism	4
tae01230	Biosynthesis of amino acids	4
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	4
tae04144	Endocytosis	4
tae05100	Bacterial invasion of epithelial cells	4
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03015	mRNA surveillance pathway	2
hvu04382	Cornified envelope formation	2
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	3
osa00020	Citrate cycle (TCA cycle)	2
osa01200	Carbon metabolism	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma03008	Ribosome biogenesis in eukaryotes	2
zma04712	Circadian rhythm - plant	2
zma04016	MAPK signaling pathway - plant	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	4
zma04141	Protein processing in endoplasmic reticulum	4
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3
sbi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3
ath05100	Bacterial invasion of epithelial cells	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	4
gma03008	Ribosome biogenesis in eukaryotes	2
gma04712	Circadian rhythm - plant	2
gma04016	MAPK signaling pathway - plant	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly04382	Cornified envelope formation	2
sly04144	Endocytosis	2
sly05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra03015	mRNA surveillance pathway	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03013	Nucleocytoplasmic transport	3
bra03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2
ppo04142	Lysosome	2
ppo04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	4
mtr04145	Phagosome	4
mtr03018	RNA degradation	3
mtr03050	Proteasome	3
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	4
mtr03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	6
ghi04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna04120	Ubiquitin mediated proteolysis	2
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2
sot04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2
cit00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04148	Efferocytosis	2
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4
nta00730	Thiamine metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100828469

100837269

123144223

123148473

123157105

123408466

123401787

4328604

100277826

100275773

100382067

110431264

8071628

818823

824958

100819271

100801317

100800780

101261178

103841690

103863020

103830124

100246888

18099873

7468946

25483469

11441474

121213990

107891265

107938838

106353220

106377229

106432118

102594675

102583029

102608543

107809696

107819873

107796192

5720305

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Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	2	3	2	1	3	2	2	3	1	3	1	2	2	3	3	2	1	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100828469 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100828469 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**