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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100829168   pentatricopeptide repeat-containing protein At3g22470, mitochondrial 
 bdi-r.1   112270850   pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like 
 tae-r.2   123052100   pentatricopeptide repeat-containing protein At5g61400 
 tae-r.2   123059793   pentatricopeptide repeat-containing protein At1g63070, mitochondrial 
 tae-r.2   123068208   pentatricopeptide repeat-containing protein At1g63070, mitochondrial 
 hvu-r.1   123442386   pentatricopeptide repeat-containing protein At1g63070, mitochondrial-like 
 zma-u.5   103647847   pentatricopeptide repeat-containing protein At1g63070, mitochondrial 
 sbi-r.1   110432880   pentatricopeptide repeat-containing protein At1g63070, mitochondrial-like 
 gma-u.5   100818511   pentatricopeptide repeat-containing protein At1g12300, mitochondrial 
 sly-u.5   101260922   pentatricopeptide repeat-containing protein At1g63330-like 
 vvi-u.5   100852839   pentatricopeptide repeat-containing protein At1g63330 
 ppo-u.5   18094141   pentatricopeptide repeat-containing protein At3g22470, mitochondrial 
 mtr-u.5   112416095   pentatricopeptide repeat-containing protein At1g05670, mitochondrial 
 mtr-u.5   11431624   pentatricopeptide repeat-containing protein At1g62680, mitochondrial 
 mtr-u.5   11434936   pentatricopeptide repeat-containing protein At1g62670, mitochondrial 
 ghi-r.1   107950609   pentatricopeptide repeat-containing protein At1g63330 
 ghi-r.1   107915725   pentatricopeptide repeat-containing protein At1g63330 
 sot-r.1   102597280   pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like 
 nta-r.1   107807738   uncharacterized LOC107807738 
 nta-r.1   107804091   uncharacterized LOC107804091 

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Top 50 coexpressed genes to 100829168 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100829168 (bdi-r.1 coexpression data)

CoexMap"100829168"


bdiLOC100829168 | Entrez gene ID : 100829168      
Species bdi tae hvu zma sbi gma sly vvi ppo mtr ghi sot nta bra cre ath cit bna osa
Paralog 2 3 1 1 1 1 1 1 1 3 2 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003562701.1 [sequence] [blastp]
XP_010235627.1 [sequence] [blastp]
XP_010235628.1 [sequence] [blastp]
XP_010235631.1 [sequence] [blastp]
XP_014753382.1 [sequence] [blastp]
XP_024313142.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 1,  mito 1,  cyto_mito 1  (predict for XP_003562701.1)
chlo 6,  extr 1,  mito 1,  cyto_mito 1  (predict for XP_010235627.1)
chlo 6,  extr 1,  mito 1,  cyto_mito 1  (predict for XP_010235628.1)
chlo 6,  extr 1,  mito 1,  cyto_mito 1  (predict for XP_010235631.1)
chlo 6,  extr 1,  mito 1,  cyto_mito 1  (predict for XP_014753382.1)
chlo 6,  extr 1,  mito 1,  cyto_mito 1  (predict for XP_024313142.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_003562701.1)
mito 7  (predict for XP_010235627.1)
mito 7  (predict for XP_010235628.1)
mito 7  (predict for XP_010235631.1)
mito 7  (predict for XP_014753382.1)
mito 7  (predict for XP_024313142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100829168
bdi-r.1
for
112270850
tae-r.2
for
123052100
tae-r.2
for
123059793
tae-r.2
for
123068208
hvu-r.1
for
123442386
zma-u.5
for
103647847
sbi-r.1
for
110432880
gma-u.5
for
100818511
sly-u.5
for
101260922
vvi-u.5
for
100852839
ppo-u.5
for
18094141
mtr-u.5
for
112416095
mtr-u.5
for
11431624
mtr-u.5
for
11434936
ghi-r.1
for
107950609
ghi-r.1
for
107915725
sot-r.1
for
102597280
nta-r.1
for
107807738
nta-r.1
for
107804091


Ortholog ID: 10589
Species bdi bdi tae tae tae hvu zma sbi gma sly vvi ppo mtr mtr mtr ghi ghi sot nta nta
Symbol LOC100829168 LOC112270850 LOC123052100 LOC123068208 LOC123068209 LOC123442386 LOC103647847 LOC110432880 LOC100818511 LOC101260922 LOC100852839 LOC18094141 LOC112416095 LOC11431624 LOC11434936 LOC107950609 LOC107915725 LOC102597280 LOC107807738 LOC107804091
Function* pentatricopeptide repeat-containing protein At3g22470, mitochondrial pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like pentatricopeptide repeat-containing protein At5g61400 pentatricopeptide repeat-containing protein At1g63070, mitochondrial pentatricopeptide repeat-containing protein At1g63070, mitochondrial pentatricopeptide repeat-containing protein At1g63070, mitochondrial-like pentatricopeptide repeat-containing protein At1g63070, mitochondrial pentatricopeptide repeat-containing protein At1g63070, mitochondrial-like pentatricopeptide repeat-containing protein At1g12300, mitochondrial pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At3g22470, mitochondrial pentatricopeptide repeat-containing protein At1g05670, mitochondrial pentatricopeptide repeat-containing protein At1g62680, mitochondrial pentatricopeptide repeat-containing protein At1g62670, mitochondrial pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At1g63330 pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like uncharacterized LOC107807738 uncharacterized LOC107804091
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03250 Viral life cycle - HIV-1 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100829168 112270850 123052100 123068208 123068209 123442386 103647847 110432880 100818511 101260922 100852839 18094141 112416095 11431624 11434936 107950609 107915725 102597280 107807738 107804091
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