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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100831316   probable small nuclear ribonucleoprotein G 
 bdi-r.1   100828642   probable small nuclear ribonucleoprotein G 
 tae-r.2   123187978   probable small nuclear ribonucleoprotein G 
 tae-r.2   123044242   probable small nuclear ribonucleoprotein G 
 hvu-r.1   123425350   probable small nuclear ribonucleoprotein G 
 osa-u.5   4333092   probable small nuclear ribonucleoprotein G 
 osa-u.5   4343870   probable small nuclear ribonucleoprotein G 
 zma-u.5   100193784   probable small nuclear ribonucleoprotein G 
 sbi-r.1   8060670   probable small nuclear ribonucleoprotein G 
 sbi-r.1   8080416   probable small nuclear ribonucleoprotein G 
 ath-u.5   SNRNP-G   Putative small nuclear ribonucleoprotein G 
 ath-u.5   AT3G11500   Small nuclear ribonucleoprotein family protein 
 gma-u.5   100799718   probable small nuclear ribonucleoprotein G 
 gma-u.5   100500333   probable small nuclear ribonucleoprotein G 
 gma-u.5   100305530   probable small nuclear ribonucleoprotein G 
 sly-u.5   101264989   probable small nuclear ribonucleoprotein G 
 sly-u.5   101245652   probable small nuclear ribonucleoprotein G 
 bra-r.6   103870221   probable small nuclear ribonucleoprotein G 
 bra-r.6   103870338   probable small nuclear ribonucleoprotein G 
 bra-r.6   103864505   probable small nuclear ribonucleoprotein G 
 vvi-u.5   100247783   probable small nuclear ribonucleoprotein G 
 ppo-u.5   7465260   probable small nuclear ribonucleoprotein G 
 ppo-u.5   7492248   probable small nuclear ribonucleoprotein G 
 mtr-u.5   25496613   probable small nuclear ribonucleoprotein G 
 mtr-u.5   11442022   probable small nuclear ribonucleoprotein G 
 ghi-r.1   107899248   probable small nuclear ribonucleoprotein G 
 ghi-r.1   107908690   probable small nuclear ribonucleoprotein G 
 ghi-r.1   107925553   probable small nuclear ribonucleoprotein G 
 bna-r.1   106452478   probable small nuclear ribonucleoprotein G 
 bna-r.1   106446548   probable small nuclear ribonucleoprotein G 
 bna-r.1   106435722   probable small nuclear ribonucleoprotein G 
 sot-r.1   102582252   probable small nuclear ribonucleoprotein G 
 sot-r.1   102582177   probable small nuclear ribonucleoprotein G 
 cit-r.1   102617205   probable small nuclear ribonucleoprotein G 
 nta-r.1   107817742   putative small nuclear ribonucleoprotein G 
 nta-r.1   107791889   putative small nuclear ribonucleoprotein G 
 nta-r.1   107769056   putative small nuclear ribonucleoprotein G 
 cre-r.1   CHLRE_13g566050v5   uncharacterized protein 

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Top 50 coexpressed genes to 100831316 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100831316 (bdi-r.1 coexpression data)

CoexMap"100831316"


bdiLOC100831316 | Entrez gene ID : 100831316      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 1 2 1 2 2 3 2 3 1 2 2 3 3 2 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03040 [list] [network] Spliceosome (282 genes)
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (21 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (166 genes)  IEA  
GO CC
GO:0043186 [list] [network] P granule  (2 genes)  IEA  
GO:0034719 [list] [network] SMN-Sm protein complex  (7 genes)  IEA  
GO:0005687 [list] [network] U4 snRNP  (9 genes)  IEA  
GO:0005682 [list] [network] U5 snRNP  (19 genes)  IEA  
GO:0005689 [list] [network] U12-type spliceosomal complex  (20 genes)  IEA  
GO:0005686 [list] [network] U2 snRNP  (23 genes)  IEA  
GO:0005685 [list] [network] U1 snRNP  (24 genes)  IEA  
GO:0071004 [list] [network] U2-type prespliceosome  (27 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (33 genes)  IEA  
GO:0097526 [list] [network] spliceosomal tri-snRNP complex  (37 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (57 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
Protein XP_003562708.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_nucl 4,  cysk_nucl 1,  mito 1  (predict for XP_003562708.1)
Subcellular
localization
TargetP
other 6  (predict for XP_003562708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100831316
bdi-r.1
for
100828642
tae-r.2
for
123187978
tae-r.2
for
123044242
hvu-r.1
for
123425350
osa-u.5
for
4333092
osa-u.5
for
4343870
zma-u.5
for
100193784
sbi-r.1
for
8060670
sbi-r.1
for
8080416
ath-u.5
for
SNRNP-G
ath-u.5
for
AT3G11500
gma-u.5
for
100799718
gma-u.5
for
100500333
gma-u.5
for
100305530
sly-u.5
for
101264989
sly-u.5
for
101245652
bra-r.6
for
103870221
bra-r.6
for
103870338
bra-r.6
for
103864505
vvi-u.5
for
100247783
ppo-u.5
for
7465260
ppo-u.5
for
7492248
mtr-u.5
for
25496613
mtr-u.5
for
11442022
ghi-r.1
for
107899248
ghi-r.1
for
107908690
ghi-r.1
for
107925553
bna-r.1
for
106452478
bna-r.1
for
106446548
bna-r.1
for
106435722
sot-r.1
for
102582252
sot-r.1
for
102582177
cit-r.1
for
102617205
nta-r.1
for
107817742
nta-r.1
for
107791889
nta-r.1
for
107769056
cre-r.1
for
CHLRE_13g566050v5


Ortholog ID: 3553
Species bdi bdi tae tae hvu osa osa sbi sbi ath ath gma gma gma sly sly bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta cre
Symbol LOC100831316 LOC100828642 LOC123187978 LOC123044242 LOC123425350 LOC4333092 LOC4343870 LOC8060670 LOC8080416 SNRNP-G AT3G11500 LOC100799718 LOC100500333 LOC100305530 LOC101264989 LOC101245652 LOC103870221 LOC103870338 LOC103864505 LOC100247783 LOC7465260 LOC7492248 LOC25496613 LOC11442022 LOC107908690 LOC107925553 LOC107896350 LOC106435722 LOC106422863 LOC106446620 LOC102582252 LOC102582177 LOC102617205 LOC107817742 LOC107791889 LOC107769056 CHLRE_13g566050v5
Function* probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G Putative small nuclear ribonucleoprotein G Small nuclear ribonucleoprotein family protein probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G probable small nuclear ribonucleoprotein G putative small nuclear ribonucleoprotein G putative small nuclear ribonucleoprotein G putative small nuclear ribonucleoprotein G uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 8
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi03040 Spliceosome 3
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03010 Ribosome 6
tae03018 RNA degradation 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
tae03040 Spliceosome 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03010 Ribosome 3
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
osa03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 6
sbi03420 Nucleotide excision repair 2
sbi03018 RNA degradation 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03040 Spliceosome 3
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03018 RNA degradation 3
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03050 Proteasome 2
bra03010 Ribosome 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
bra00190 Oxidative phosphorylation 3
bra03018 RNA degradation 3
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
ppo04120 Ubiquitin mediated proteolysis 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03018 RNA degradation 3
ppo03010 Ribosome 3
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03020 RNA polymerase 3
mtr03420 Nucleotide excision repair 3
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 10
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03410 Base excision repair 2
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03050 Proteasome 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03010 Ribosome 7
bna03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03018 RNA degradation 3
sot03010 Ribosome 2
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03040 Spliceosome 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 11
nta03018 RNA degradation 7
nta00564 Glycerophospholipid metabolism 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta03040 Spliceosome 6
nta03018 RNA degradation 4
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta04141 Protein processing in endoplasmic reticulum 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 12
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100831316 100828642 123187978 123044242 123425350 4333092 4343870 8060670 8080416 816925 820323 100799718 100500333 100305530 101264989 101245652 103870221 103870338 103864505 100247783 7465260 7492248 25496613 11442022 107908690 107925553 107896350 106435722 106422863 106446620 102582252 102582177 102617205 107817742 107791889 107769056 5719053
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