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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834089   thioredoxin F, chloroplastic 
 tae-r.2   123063024   thioredoxin F, chloroplastic 
 tae-r.2   123071915   thioredoxin F, chloroplastic 
 tae-r.2   123080234   thioredoxin F, chloroplastic 
 hvu-r.1   123445179   thioredoxin F, chloroplastic-like 
 osa-u.5   4324320   thioredoxin F, chloroplastic-like 
 zma-u.5   100273021   uncharacterized LOC100273021 
 zma-u.5   100283787   uncharacterized LOC100283787 
 sbi-r.1   110430507   thioredoxin F, chloroplastic-like 
 ath-u.5   TRXF1   thioredoxin F-type 1 
 ath-u.5   TRXF2   thioredoxin F2 
 gma-u.5   100499776   uncharacterized LOC100499776 
 gma-u.5   100306555   uncharacterized LOC100306555 
 sly-u.5   101246719   thioredoxin F1, chloroplastic-like 
 bra-r.6   103851040   thioredoxin F2, chloroplastic 
 bra-r.6   103870898   thioredoxin F1, chloroplastic 
 vvi-u.5   100261565   thioredoxin F-type, chloroplastic 
 ppo-u.5   7459228   thioredoxin F-type, chloroplastic 
 mtr-u.5   11427442   thioredoxin F-type, chloroplastic 
 ghi-r.1   107920684   thioredoxin F-type, chloroplastic 
 ghi-r.1   107895054   thioredoxin F-type, chloroplastic 
 bna-r.1   125587561   thioredoxin F1, chloroplastic-like 
 bna-r.1   125587565   thioredoxin F1, chloroplastic-like 
 bna-r.1   125593961   thioredoxin F2, chloroplastic-like 
 sot-r.1   102579084   thioredoxin F1, chloroplastic-like 
 cit-r.1   102626995   thioredoxin F-type, chloroplastic-like 
 nta-r.1   107803208   thioredoxin F1, chloroplastic-like 
 nta-r.1   107765647   thioredoxin F-type, chloroplastic 
 cre-r.1   CHLRE_01g066552v5   uncharacterized protein 
 cre-r.1   CHLRE_05g243050v5   uncharacterized protein 

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Top 50 coexpressed genes to 100834089 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834089 (bdi-r.1 coexpression data)

CoexMap"100834089"


bdiLOC100834089 | Entrez gene ID : 100834089      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 2 2 1 2 1 1 1 2 3 1 1 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_003564899.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003564899.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003564899.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834089
tae-r.2
for
123063024
tae-r.2
for
123071915
tae-r.2
for
123080234
hvu-r.1
for
123445179
osa-u.5
for
4324320
zma-u.5
for
100273021
zma-u.5
for
100283787
sbi-r.1
for
110430507
ath-u.5
for
TRXF1
ath-u.5
for
TRXF2
gma-u.5
for
100499776
gma-u.5
for
100306555
sly-u.5
for
101246719
bra-r.6
for
103851040
bra-r.6
for
103870898
vvi-u.5
for
100261565
ppo-u.5
for
7459228
mtr-u.5
for
11427442
ghi-r.1
for
107920684
ghi-r.1
for
107895054
bna-r.1
for
125587561
bna-r.1
for
125587565
bna-r.1
for
125593961
sot-r.1
for
102579084
cit-r.1
for
102626995
nta-r.1
for
107803208
nta-r.1
for
107765647
cre-r.1
for
CHLRE_01g066552v5
cre-r.1
for
CHLRE_05g243050v5


Ortholog ID: 5748
Species bdi tae tae tae hvu osa zma zma sbi ath ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre cre
Symbol LOC100834089 LOC123063024 LOC123071915 LOC123080234 LOC123445179 LOC4324320 LOC100273021 LOC100283787 LOC110430507 TRXF1 TRXF2 LOC100499776 LOC100306555 LOC101246719 LOC103851040 LOC103870898 LOC100261565 LOC7459228 LOC11427442 LOC107920684 LOC107895054 LOC106354457 LOC106387275 LOC106423635 LOC102579084 LOC102626995 LOC107803208 LOC107765647 CHLRE_01g066552v5 CHLRE_05g243050v5
Function* thioredoxin F, chloroplastic thioredoxin F, chloroplastic thioredoxin F, chloroplastic thioredoxin F, chloroplastic thioredoxin F, chloroplastic-like thioredoxin F, chloroplastic-like uncharacterized LOC100273021 uncharacterized LOC100283787 thioredoxin F, chloroplastic-like thioredoxin F-type 1 thioredoxin F2 uncharacterized LOC100499776 uncharacterized LOC100306555 thioredoxin F1, chloroplastic-like thioredoxin F2, chloroplastic thioredoxin F1, chloroplastic thioredoxin F-type, chloroplastic thioredoxin F-type, chloroplastic thioredoxin F-type, chloroplastic thioredoxin F-type, chloroplastic thioredoxin F-type, chloroplastic thioredoxin F2, chloroplastic-like thioredoxin F-type, chloroplastic-like thioredoxin F2, chloroplastic-like thioredoxin F1, chloroplastic-like thioredoxin F-type, chloroplastic-like thioredoxin F1, chloroplastic-like thioredoxin F-type, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 8
zma00195 Photosynthesis 5
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 5
zma01200 Carbon metabolism 5
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 7
ath00196 Photosynthesis - antenna proteins 6
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 6
gma00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 6
mtr00860 Porphyrin metabolism 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 2
cre00710 Carbon fixation by Calvin cycle 2
cre01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834089 123063024 123071915 123080234 123445179 4324320 100273021 100283787 110430507 821260 831501 100499776 100306555 101246719 103851040 103870898 100261565 7459228 11427442 107920684 107895054 106354457 106387275 106423635 102579084 102626995 107803208 107765647 5725754 66053462
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