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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834565   F-box protein At5g50450 
 bdi-r.1   100823153   F-box protein At1g67340 
 tae-r.2   123189043   F-box protein At5g50450 
 tae-r.2   123053135   F-box protein At5g50450 
 tae-r.2   123045295   F-box protein At5g50450 
 hvu-r.1   123445246   F-box protein At1g67340-like 
 hvu-r.1   123426528   F-box protein At5g50450 
 osa-u.5   4327753   F-box protein At1g67340 
 osa-u.5   4335651   F-box protein At1g67340 
 zma-u.5   103627164   F-box protein At5g50450 
 zma-u.5   100501731   F-box protein At1g67340 
 zma-u.5   100286055   MYND finger family protein 
 sbi-r.1   8068715   F-box protein At1g67340 
 sbi-r.1   8079805   F-box protein At1g67340 
 sbi-r.1   8082748   F-box protein At1g67340 
 ath-u.5   AT5G50450   HCP-like superfamily protein with MYND-type zinc finger 
 ath-u.5   AT1G67340   HCP-like superfamily protein with MYND-type zinc finger 
 gma-u.5   100797397   F-box protein 
 gma-u.5   100798136   F-box protein At1g67340 
 gma-u.5   100798174   F-box protein At1g67340 
 sly-u.5   101267990   F-box protein At1g67340 
 bra-r.6   103852397   F-box protein At1g67340 
 bra-r.6   103831166   F-box protein At1g67340 
 bra-r.6   103831030   F-box protein At1g67340 
 vvi-u.5   100260936   F-box protein At1g67340 
 ppo-u.5   7454555   F-box protein At5g50450 
 ppo-u.5   7460549   F-box protein At1g67340 
 ppo-u.5   7496569   F-box protein At1g67340 
 mtr-u.5   25501750   F-box protein At1g67340 
 mtr-u.5   11434668   F-box protein At5g50450 
 mtr-u.5   11429082   F-box protein At1g67340 
 ghi-r.1   121224271   F-box protein At5g50450 
 ghi-r.1   121210980   F-box protein At1g67340 
 ghi-r.1   107946269   F-box protein At1g67340 
 bna-r.1   125588634   F-box protein At1g67340-like 
 bna-r.1   106375967   F-box protein At5g50450-like 
 bna-r.1   106353934   F-box protein At1g67340 
 sot-r.1   102590665   F-box protein At1g67340 
 cit-r.1   102614047   F-box protein At1g67340 
 cit-r.1   102607857   F-box protein At1g67340 
 nta-r.1   107805269   F-box protein At1g67340 
 nta-r.1   107778365   F-box protein At1g67340-like 

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Top 50 coexpressed genes to 100834565 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834565 (bdi-r.1 coexpression data)

CoexMap"100834565"


bdiLOC100834565 | Entrez gene ID : 100834565      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 2 3 3 2 3 1 3 1 3 3 3 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003579609.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 4,  chlo 1  (predict for XP_003579609.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for XP_003579609.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834565
bdi-r.1
for
100823153
tae-r.2
for
123189043
tae-r.2
for
123053135
tae-r.2
for
123045295
hvu-r.1
for
123445246
hvu-r.1
for
123426528
osa-u.5
for
4327753
osa-u.5
for
4335651
zma-u.5
for
103627164
zma-u.5
for
100501731
zma-u.5
for
100286055
sbi-r.1
for
8068715
sbi-r.1
for
8079805
sbi-r.1
for
8082748
ath-u.5
for
AT5G50450
ath-u.5
for
AT1G67340
gma-u.5
for
100797397
gma-u.5
for
100798136
gma-u.5
for
100798174
sly-u.5
for
101267990
bra-r.6
for
103852397
bra-r.6
for
103831166
bra-r.6
for
103831030
vvi-u.5
for
100260936
ppo-u.5
for
7454555
ppo-u.5
for
7460549
ppo-u.5
for
7496569
mtr-u.5
for
25501750
mtr-u.5
for
11434668
mtr-u.5
for
11429082
ghi-r.1
for
121224271
ghi-r.1
for
121210980
ghi-r.1
for
107946269
bna-r.1
for
125588634
bna-r.1
for
106375967
bna-r.1
for
106353934
sot-r.1
for
102590665
cit-r.1
for
102614047
cit-r.1
for
102607857
nta-r.1
for
107805269
nta-r.1
for
107778365


Ortholog ID: 1885
Species bdi bdi tae tae hvu hvu osa osa osa zma zma zma sbi sbi sbi ath ath gma gma gma sly bra bra bra vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot cit cit nta nta
Symbol LOC100834565 LOC100823153 LOC123189043 LOC123072032 LOC123445246 LOC123426528 LOC4327753 LOC4335651 LOC9272396 LOC103627164 LOC100286055 LOC100273107 LOC8068715 LOC8079805 LOC8082748 AT5G50450 AT1G67340 LOC100819013 LOC100820040 LOC100781713 LOC101267990 LOC103852397 LOC103831166 LOC103852190 LOC100260936 LOC7454555 LOC7460549 LOC7496569 LOC25501750 LOC11434668 LOC11422326 LOC107946269 LOC107941965 LOC107920907 LOC106375967 LOC106353934 LOC106411297 LOC102590665 LOC102614047 LOC102607857 LOC107805269 LOC107778365
Function* F-box protein At5g50450 F-box protein At1g67340 F-box protein At5g50450 F-box protein At1g67340 F-box protein At1g67340-like F-box protein At5g50450 F-box protein At1g67340 F-box protein At1g67340 F-box protein At5g50450 F-box protein At5g50450 MYND finger family protein uncharacterized LOC100273107 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 HCP-like superfamily protein with MYND-type zinc finger HCP-like superfamily protein with MYND-type zinc finger F-box protein At1g67340 F-box protein At5g50450 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At5g50450 F-box protein At1g67340 F-box protein At5g50450 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At5g50450 F-box protein At5g50450 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At5g50450-like F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340 F-box protein At1g67340-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00750 Vitamin B6 metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00030 Pentose phosphate pathway 2
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 8
ghi04075 Plant hormone signal transduction 8
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 3
cit04517 IgSF CAM signaling 3
cit04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834565 100823153 123189043 123072032 123445246 123426528 4327753 4335651 9272396 103627164 100286055 100273107 8068715 8079805 8082748 835113 843055 100819013 100820040 100781713 101267990 103852397 103831166 103852190 100260936 7454555 7460549 7496569 25501750 11434668 11422326 107946269 107941965 107920907 106375967 106353934 106411297 102590665 102614047 102607857 107805269 107778365
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