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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834697   transcription factor PCL1 
 bdi-r.1   100824981   transcription factor PCL1 
 bdi-r.1   100835635   transcription factor MYBC1 
 tae-r.2   123055624   transcription factor MYBC1 
 tae-r.2   123182013   transcription factor MYBC1 
 tae-r.2   123132713   transcription factor MYBC1 
 hvu-r.1   123441160   transcription factor PCL1-like 
 hvu-r.1   123442999   transcription factor MYBC1-like 
 hvu-r.1   123440532   transcription factor PCL1-like 
 osa-u.5   4338783   transcription factor MYBC1 
 osa-u.5   4326391   transcription factor PCL1-like 
 osa-u.5   4327512   transcription factor PCL1-like 
 zma-u.5   103651023   transcription factor PCL1 
 zma-u.5   107305672   Homeodomain-like superfamily protein 
 zma-u.5   107548110   Putative MYB DNA-binding domain superfamily protein 
 sbi-r.1   110433282   transcription factor PCL1-like 
 sbi-r.1   8074136   transcription factor PCL1 
 sbi-r.1   8085135   transcription factor MYBC1 
 ath-u.5   MYBC1   Homeodomain-like superfamily protein 
 ath-u.5   AT3G10760   Homeodomain-like superfamily protein 
 ath-u.5   PCL1   Homeodomain-like superfamily protein 
 gma-u.5   LUXC   transcription factor LUXc 
 gma-u.5   LUXB   transcription factor LUXb 
 gma-u.5   100815363   transcription factor MYBC1 
 sly-u.5   PCL1   transcription factor PCL1 
 sly-u.5   101265183   transcription factor MYBC1 
 bra-r.6   103873296   transcription factor LUX-like 
 bra-r.6   103846867   transcription factor MYBC1 
 bra-r.6   103870437   transcription factor MYBC1 
 vvi-u.5   100253567   transcription factor PCL1 
 vvi-u.5   100256764   transcription factor MYBC1 
 ppo-u.5   18106100   transcription factor MYBC1 
 ppo-u.5   7465095   transcription factor BOA 
 ppo-u.5   7468625   transcription factor BOA 
 mtr-u.5   11415024   transcription factor MYBC1 
 mtr-u.5   11427644   transcription factor PCL1 
 ghi-r.1   107886017   transcription factor BOA 
 ghi-r.1   107906573   transcription factor PCL1 
 ghi-r.1   121203048   transcription factor MYBC1 
 bna-r.1   125608883   transcription factor MYBC1-like 
 bna-r.1   106418472   transcription factor MYBC1-like 
 bna-r.1   106415449   transcription factor LUX 
 sot-r.1   102588078   transcription factor LUX 
 sot-r.1   102585758   transcription factor PCL1-like 
 sot-r.1   102600588   transcription factor PCL1-like 
 cit-r.1   102629958   transcription factor MYBC1-like 
 cit-r.1   102629795   transcription factor LUX 
 nta-r.1   107769728   transcription factor MYBC1-like 
 nta-r.1   107763213   transcription factor PCL1-like 
 nta-r.1   107824744   transcription factor MYBC1-like 
 cre-r.1   CHLRE_09g410450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100834697 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834697 (bdi-r.1 coexpression data)

CoexMap"100834697"


bdiLOC100834697 | Entrez gene ID : 100834697      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 3 3 3 3 3 3 2 3 2 3 2 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1579 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1057 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003565161.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003565161.1)
Subcellular
localization
TargetP
other 9,  chlo 3  (predict for XP_003565161.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834697
bdi-r.1
for
100824981
bdi-r.1
for
100835635
tae-r.2
for
123055624
tae-r.2
for
123182013
tae-r.2
for
123132713
hvu-r.1
for
123441160
hvu-r.1
for
123442999
hvu-r.1
for
123440532
osa-u.5
for
4338783
osa-u.5
for
4326391
osa-u.5
for
4327512
zma-u.5
for
103651023
zma-u.5
for
107305672
zma-u.5
for
107548110
sbi-r.1
for
110433282
sbi-r.1
for
8074136
sbi-r.1
for
8085135
ath-u.5
for
MYBC1
ath-u.5
for
AT3G10760
ath-u.5
for
PCL1
gma-u.5
for
LUXC
gma-u.5
for
LUXB
gma-u.5
for
100815363
sly-u.5
for
PCL1
sly-u.5
for
101265183
bra-r.6
for
103873296
bra-r.6
for
103846867
bra-r.6
for
103870437
vvi-u.5
for
100253567
vvi-u.5
for
100256764
ppo-u.5
for
18106100
ppo-u.5
for
7465095
ppo-u.5
for
7468625
mtr-u.5
for
11415024
mtr-u.5
for
11427644
ghi-r.1
for
107886017
ghi-r.1
for
107906573
ghi-r.1
for
121203048
bna-r.1
for
125608883
bna-r.1
for
106418472
bna-r.1
for
106415449
sot-r.1
for
102588078
sot-r.1
for
102585758
sot-r.1
for
102600588
cit-r.1
for
102629958
cit-r.1
for
102629795
nta-r.1
for
107769728
nta-r.1
for
107763213
nta-r.1
for
107824744
cre-r.1
for
CHLRE_09g410450v5


Ortholog ID: 1039
Species bdi bdi bdi tae tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC100834697 LOC100824981 LOC100835635 LOC123055624 LOC123132713 LOC123080986 LOC123441160 LOC123442999 LOC123440532 LOC4338783 LOC4326391 LOC4327512 LOC107305672 LOC109945291 LOC100280967 LOC110433282 LOC8074136 LOC8085135 MYBC1 AT3G10760 PCL1 LOC100815363 LOC100816747 LOC100797237 LOC101265183 LOC101249222 LOC103873296 LOC103847329 LOC103866525 LOC100253567 LOC100256764 LOC7465095 LOC7468625 LOC7495685 LOC11415024 LOC11427644 LOC107906573 LOC107959134 LOC107922230 LOC106376459 LOC106347546 LOC106434567 LOC102585758 LOC102600588 LOC102580374 LOC102629958 LOC102629795 LOC107763213 LOC107824744 LOC107774049 CHLRE_09g410450v5
Function* transcription factor PCL1 transcription factor PCL1 transcription factor MYBC1 transcription factor MYBC1 transcription factor MYBC1 transcription factor PCL1 transcription factor PCL1-like transcription factor MYBC1-like transcription factor PCL1-like transcription factor MYBC1 transcription factor PCL1-like transcription factor PCL1-like Homeodomain-like superfamily protein transcription factor PCL1 ARR1 protein-like transcription factor PCL1-like transcription factor PCL1 transcription factor MYBC1 Homeodomain-like superfamily protein Homeodomain-like superfamily protein Homeodomain-like superfamily protein transcription factor MYBC1 transcription factor MYBC1 transcription factor MYBC1 transcription factor MYBC1 transcription factor MYBC1-like transcription factor LUX-like transcription factor MYBC1 transcription factor MYBC1 transcription factor PCL1 transcription factor MYBC1 transcription factor BOA transcription factor BOA transcription factor MYBC1 transcription factor MYBC1 transcription factor PCL1 transcription factor PCL1 transcription factor PCL1 transcription factor MYBC1 transcription factor LUX-like transcription factor LUX transcription factor MYBC1 transcription factor PCL1-like transcription factor PCL1-like transcription factor PCL1-like transcription factor MYBC1-like transcription factor LUX transcription factor PCL1-like transcription factor MYBC1-like transcription factor PCL1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 5
sbi00730 Thiamine metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 6
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834697 100824981 100835635 123055624 123132713 123080986 123441160 123442999 123440532 4338783 4326391 4327512 107305672 109945291 100280967 110433282 8074136 8085135 818697 820245 823817 100815363 100816747 100797237 101265183 101249222 103873296 103847329 103866525 100253567 100256764 7465095 7468625 7495685 11415024 11427644 107906573 107959134 107922230 106376459 106347546 106434567 102585758 102600588 102580374 102629958 102629795 107763213 107824744 107774049 5722278
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