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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834960   methylthioribose-1-phosphate isomerase 
 osa-u.5   4350083   methylthioribose-1-phosphate isomerase-like 
 ath-u.5   AT2G05830   NagB/RpiA/CoA transferase-like superfamily protein 
 gma-u.5   100799311   methylthioribose-1-phosphate isomerase-like 
 sly-u.5   101266846   methylthioribose-1-phosphate isomerase 
 vvi-u.5   100268031   Methylthioribose-1-phosphate isomerase 
 ppo-u.5   7491987   methylthioribose-1-phosphate isomerase 
 mtr-u.5   11438158   methylthioribose-1-phosphate isomerase 

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Top 50 coexpressed genes to 100834960 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834960 (bdi-r.1 coexpression data)

CoexMap"100834960"


bdiLOC100834960 | Entrez gene ID : 100834960      
Species bdi osa ath gma sly vvi ppo mtr tae hvu zma ghi cit bra cre sbi bna nta sot
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00270 [list] [network] Cysteine and methionine metabolism (110 genes)
GO BP
GO:0019509 [list] [network] L-methionine salvage from methylthioadenosine  (7 genes)  IEA  
GO CC
GO MF
GO:0046523 [list] [network] S-methyl-5-thioribose-1-phosphate isomerase activity  (1 genes)  IEA  
Protein XP_003577698.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 3,  cyto 3,  E.R._plas 3,  E.R. 1,  cyto_nucl 1,  cyto_pero 1  (predict for XP_003577698.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003577698.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834960

.
osa-u.5
for
4350083

.
ath-u.5
for
AT2G05830

.
gma-u.5
for
100799311

.
sly-u.5
for
101266846

.
vvi-u.5
for
100268031

.
ppo-u.5
for
7491987

.
mtr-u.5
for
11438158

.


Ortholog ID: 11935
Species ath gma sly osa bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G05830 LOC100799311 LOC101266846 LOC4350083 LOC103828510 LOC100268031 LOC7491987 LOC11438158 LOC123096367 LOC123091398 LOC123447876 LOC107893370 LOC106405951 LOC106405952 LOC110435746 LOC102596204 LOC102610062 LOC100834960 LOC107791399 LOC107774973
Function* NagB/RpiA/CoA transferase-like superfamily protein methylthioribose-1-phosphate isomerase-like methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase-like methylthioribose-1-phosphate isomerase Methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase methylthioribose-1-phosphate isomerase-like methylthioribose-1-phosphate isomerase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00270 Cysteine and methionine metabolism 4
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ath01230 Biosynthesis of amino acids 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 10
gma00020 Citrate cycle (TCA cycle) 9
gma01210 2-Oxocarboxylic acid metabolism 8
gma00620 Pyruvate metabolism 5
gma00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00620 Pyruvate metabolism 3
sly00710 Carbon fixation by Calvin cycle 3
sly00190 Oxidative phosphorylation 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 6
bra03010 Ribosome 4
bra03040 Spliceosome 3
bra03008 Ribosome biogenesis in eukaryotes 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03083 Polycomb repressive complex 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 3
ppo01200 Carbon metabolism 3
ppo00480 Glutathione metabolism 2
ppo00620 Pyruvate metabolism 2
ppo00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 9
tae00900 Terpenoid backbone biosynthesis 3
tae04146 Peroxisome 3
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 8
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
tae04144 Endocytosis 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 4
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04081 Hormone signaling 3
ghi04082 Neuroactive ligand signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00270 Cysteine and methionine metabolism 4
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 5
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00270 Cysteine and methionine metabolism 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 4
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 8
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta01230 Biosynthesis of amino acids 4
nta00480 Glutathione metabolism 3
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta00270 Cysteine and methionine metabolism 5
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
nta00480 Glutathione metabolism 3
nta00290 Valine, leucine and isoleucine biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815134 100799311 101266846 4350083 103828510 100268031 7491987 11438158 123096367 123091398 123447876 107893370 106405951 106405952 110435746 102596204 102610062 100834960 107791399 107774973
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